RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 IGFBP7Q16270 282 aa10.61□□□□□ -0.71
NUP88-201ENST00000225696 CLEC18CQ8NCF0 446 aa10.61□□□□□ -0.71
NUP88-201ENST00000225696 INTS12Q96CB8 462 aaKnown RBP10.61□□□□□ -0.71
NUP88-201ENST00000225696 GNPNAT1Q96EK6 184 aaPredicted RBP10.61□□□□□ -0.71
NUP88-201ENST00000225696 FOXB1Q99853 325 aa10.61□□□□□ -0.71
NUP88-201ENST00000225696 TCFL5Q9UL49 500 aa10.61□□□□□ -0.71
NUP88-201ENST00000225696 ZNF816-ZNF321PA0A0X1KG74 233 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 CXCL13O43927 109 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 PGLYRP1O75594 196 aaPredicted RBP10.6□□□□□ -0.71
NUP88-201ENST00000225696 MMP9P14780 707 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 GPM6AP51674 278 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 CLDN15P56746 228 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 NKX6-1P78426 367 aaPredicted RBP10.6□□□□□ -0.71
NUP88-201ENST00000225696 SRPXP78539 464 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 TLE4Q04727 773 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 HNF4GQ14541 408 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 GGNQ86UU5 652 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 DMRTC2Q8IXT2 367 aaPredicted RBP10.6□□□□□ -0.71
NUP88-201ENST00000225696 OR51H1Q8NH63 302 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 S100PBPQ96BU1 408 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 GPR146Q96CH1 333 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 MEGF10Q96KG7 1140 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 SNX22Q96L94 193 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 IMMP1LQ96LU5 166 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 SIRT7Q9NRC8 400 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 MTCH1Q9NZJ7 389 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 C19orf25Q9UFG5 118 aaPredicted RBP10.6□□□□□ -0.71
NUP88-201ENST00000225696 OR5H1A6NKK0 313 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 TOX3O15405 576 aaPredicted RBP10.6□□□□□ -0.71
NUP88-201ENST00000225696 TUSC2O75896 110 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 SRFP11831 508 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 COX6A1P12074 109 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 CCNOP22674 350 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 C9orf135Q5VTT2 229 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 PCSK4Q6UW60 755 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 AAED1Q7RTV5 226 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 WDR5BQ86VZ2 330 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 FAM185AQ8N0U4 392 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 OR56B2PQ8NGI1 322 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 RBMXL1Q96E39 390 aaKnown RBP10.6□□□□□ -0.71
NUP88-201ENST00000225696 ZNF488Q96MN9 340 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 SPIN2AQ99865 258 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 SPIN2BQ9BPZ2 258 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 OPA3Q9H6K4 179 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 SH2D2AQ9NP31 389 aa10.6□□□□□ -0.71
NUP88-201ENST00000225696 PTRH2Q9Y3E5 179 aaKnown RBP10.6□□□□□ -0.71
NUP88-201ENST00000225696 TRAV39A0A0B4J263 110 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 A0A1B0GU03 582 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 PSG2P11465 335 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 IGFBP4P22692 258 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 CARD18P57730 90 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 RAC3P60763 192 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 BAXQ07812 192 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 BEND4Q6ZU67 534 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 HAPLN4Q86UW8 402 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 CPT1CQ8TCG5 803 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 ABHD3Q8WU67 409 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 ZNF845Q96IR2 970 aaPredicted RBP10.59□□□□□ -0.71
NUP88-201ENST00000225696 HIST1H2BLQ99880 126 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 GFOD1Q9NXC2 390 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 ESPL1Q14674 2120 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 KLF7O75840 302 aaPredicted RBP10.59□□□□□ -0.71
NUP88-201ENST00000225696 IGKV1-39P01597 117 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 IGKV1D-39P04432 117 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 MMP7P09237 267 aaPredicted RBP10.59□□□□□ -0.71
NUP88-201ENST00000225696 IAPPP10997 89 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 WDR25Q64LD2 544 aaPredicted RBP10.59□□□□□ -0.71
NUP88-201ENST00000225696 FAM180AQ6UWF9 173 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 CA5BP1Q8WTZ4 195 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 DNASE2BQ8WZ79 361 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 COL6A3P12111 3177 aa10.59□□□□□ -0.71
NUP88-201ENST00000225696 ARGFXA6NJG6 315 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 SYNGR1O43759 233 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 METTL15P1P0C7V9 234 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 BCL2P10415 239 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 SSR4P51571 173 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 IL24Q13007 206 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 OR1K1Q8NGR3 316 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 SNIP1Q8TAD8 396 aaKnown RBP10.58□□□□□ -0.72
NUP88-201ENST00000225696 NEK7Q8TDX7 302 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 GPR35Q9HC97 309 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 PRDM6Q9NQX0 595 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 OR14J1Q9UGF5 321 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 LOC102723996A0A087X1L8 192 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 A0A096LPE4 126 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 A0A1W2PPZ6 126 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 ZNF503-AS2A6NEH8 195 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 HS3ST1O14792 307 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 PTBP3O95758 552 aaKnown RBP10.58□□□□□ -0.72
NUP88-201ENST00000225696 F2RP25116 425 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 IL2RGP31785 369 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 RND2P52198 227 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 FOXG1P55316 489 aaPredicted RBP10.58□□□□□ -0.72
NUP88-201ENST00000225696 PRDX4Q13162 271 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 ZNF787Q6DD87 383 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 SLC25A24Q6NUK1 477 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 Q8NFD4 153 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 OR5D13Q8NGL4 314 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 UBALD1Q8TB05 177 aa10.58□□□□□ -0.72
NUP88-201ENST00000225696 RCC1LQ96I51 464 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms