RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 TRGV10A0A0A0MS01 117 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 TRAV20A0A0B4J274 112 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 LIPFP07098 398 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 CCL3L1P16619 93 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 HACD4Q5VWC8 232 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 BTNL3Q6UXE8 466 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 GLCCI1Q86VQ1 547 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 SNX29P2Q8IUI4 249 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 GAPTQ8N292 157 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 OR6Q1Q8NGQ2 317 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 OR13A1Q8NGR1 328 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 MRGPRDQ8TDS7 321 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 NUDCD2Q8WVJ2 157 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 GCDHQ92947 438 aaPredicted RBP13.49□□□□□ -0.25
LIM2-201ENST00000221973 DACT3Q96B18 629 aaPredicted RBP13.49□□□□□ -0.25
LIM2-201ENST00000221973 WDFY2Q96P53 400 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 NCOR1P1Q9H4R4 102 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 C12orf4Q9NQ89 552 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 OR6C3Q9NZP0 311 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 ONECUT1Q9UBC0 465 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 LINC00312Q9Y6C7 94 aa13.49□□□□□ -0.25
LIM2-201ENST00000221973 KIR2DS1A0A191URI9 304 aa13.48□□□□□ -0.25
LIM2-201ENST00000221973 NAPSAO96009 420 aa13.48□□□□□ -0.25
LIM2-201ENST00000221973 HLA-DQB1P01920 261 aa13.48□□□□□ -0.25
LIM2-201ENST00000221973 DVL1P1P54792 670 aaPredicted RBP13.48□□□□□ -0.25
LIM2-201ENST00000221973 ARF6P62330 175 aa13.48□□□□□ -0.25
LIM2-201ENST00000221973 PNLIPRP3Q17RR3 467 aa13.48□□□□□ -0.25
LIM2-201ENST00000221973 DCAF12L2Q5VW00 463 aa13.48□□□□□ -0.25
LIM2-201ENST00000221973 ZNF565Q8N9K5 539 aa13.48□□□□□ -0.25
LIM2-201ENST00000221973 RIMS4Q9H426 269 aaPredicted RBP13.48□□□□□ -0.25
LIM2-201ENST00000221973 INSIG2Q9Y5U4 225 aa13.48□□□□□ -0.25
LIM2-201ENST00000221973 A0A0G2JMP0 313 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 A0A0X1KG70 313 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 A0A1W2PPH5 198 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 SSX5O60225 188 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 MELTFP08582 738 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 ZNF728P0DKX0 622 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 RCC1P18754 421 aaPredicted RBP13.47□□□□□ -0.25
LIM2-201ENST00000221973 GUCA2AQ02747 115 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 IL18Q14116 193 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 FAHD2BQ6P2I3 314 aaPredicted RBP13.47□□□□□ -0.25
LIM2-201ENST00000221973 Q6ZPA2 131 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 OR4M2Q8NGB6 313 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 MAFIPQ8WZ33 124 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 CORO2AQ92828 525 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 FAHD2AQ96GK7 314 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 ZNF714Q96N38 554 aa13.47□□□□□ -0.25
LIM2-201ENST00000221973 ZNF230Q9UIE0 474 aaPredicted RBP13.47□□□□□ -0.25
LIM2-201ENST00000221973 UBE2J1Q9Y385 318 aaPredicted RBP13.47□□□□□ -0.25
LIM2-201ENST00000221973 FABP12A6NFH5 140 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 FCGR3AP08637 254 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 PRSS3P35030 304 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 DLX6P56179 175 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 ERVFRD-1P60508 538 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 PITPNAQ00169 270 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 RNASE12Q5GAN4 147 aaKnown RBP13.46□□□□□ -0.25
LIM2-201ENST00000221973 FAM131AQ6UXB0 335 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 BAIAP2L2Q6UXY1 529 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 C5orf24Q7Z6I8 188 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 UBALD1Q8TB05 177 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 ABHD1Q96SE0 405 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 ST6GALNAC5Q9BVH7 336 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 Q9N2K0 584 aa13.46□□□□□ -0.25
LIM2-201ENST00000221973 MBNL3Q9NUK0 354 aaKnown RBP13.46□□□□□ -0.25
LIM2-201ENST00000221973 TRBV6-6A0A0A6YYG2 114 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 MEIOCA2RUB1 952 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 MEIS3P1A6NDR6 274 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 ZNF729A6NN14 1252 aaPredicted RBP13.45□□□□□ -0.26
LIM2-201ENST00000221973 FCER2P06734 321 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 GZMHP20718 246 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 GATA3P23771 443 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 SSTR5P35346 364 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 PAX8Q06710 450 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 C17orf58Q2M2W7 97 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 C6orf183Q5T699 404 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 PYHIN1Q6K0P9 492 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 ZNF880Q6PDB4 577 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 CCDC190Q86UF4 302 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 PRR18Q8N4B5 295 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 RFESDQ8TAC1 157 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 ARL11Q969Q4 196 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 GAL3ST2Q9H3Q3 398 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 C7orf69Q9H7B7 122 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 TAF9BQ9HBM6 251 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 TAS2R3Q9NYW6 316 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 CALYQ9NYX4 217 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 KCNIP1Q9NZI2 227 aa13.45□□□□□ -0.26
LIM2-201ENST00000221973 KBTBD11-OT1A0A1B0GTJ5 212 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 C12orf77C9JDV5 145 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 M0R1W7 72 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 TCF21O43680 179 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 CGB3P0DN86 165 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 CGB7P0DN87 165 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 OMGP23515 440 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 DTYMKP23919 212 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 DLX1P56177 255 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 LTC4SQ16873 150 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 SPANXN2Q5MJ10 180 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 PRAMEF5Q5TYX0 476 aa13.44□□□□□ -0.26
LIM2-201ENST00000221973 METTL11BQ5VVY1 283 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms