RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 MUC3AQ02505 3323 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 RALGAPA1Q6GYQ0 2036 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 LOC102723971A0A1B0GUV8 181 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 CORTO00230 105 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 LILRA1O75019 489 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 TIAF1O95411 115 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 EPHA8P29322 1005 aaPredicted RBP11.79□□□□□ -0.52
GABPB1-201ENST00000220429 CLEC12BQ2HXU8 276 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 TMEM41BQ5BJD5 291 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 ASPHD2Q6ICH7 369 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 DPY19L4Q7Z388 723 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 SAXO1Q8IYX7 474 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 FAM89BQ8N5H3 189 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 CISD2Q8N5K1 135 aaKnown RBP11.79□□□□□ -0.52
GABPB1-201ENST00000220429 OR6N2Q8NGY6 317 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 SERTM2A0A1B0GWG4 89 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 OR5B21A6NL26 309 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 M0R296 226 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 CTRLP40313 264 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 SGCBQ16585 318 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 GUSBP11Q6P575 273 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 TMEM123Q8N131 208 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 CMTM2Q8TAZ6 248 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 ABHD6Q9BV23 337 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 SLC5A6Q9Y289 635 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 KIF26BQ2KJY2 2108 aa11.79□□□□□ -0.52
GABPB1-201ENST00000220429 IGLV3-12A0A075B6K2 115 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 LY6G6EA0A0G2JKS1 128 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 C9orf172C9J069 976 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 SOX1O00570 391 aaPredicted RBP11.78□□□□□ -0.52
GABPB1-201ENST00000220429 HYPMO75409 117 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 ALOX5APP20292 161 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 ATP6V0CP27449 155 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 RBMXP38159 391 aaKnown RBP11.78□□□□□ -0.52
GABPB1-201ENST00000220429 TPPP2P59282 170 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 PAFAH1B2P68402 229 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 SPATA45Q537H7 98 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 OTPQ5XKR4 325 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 PLSCR4Q9NRQ2 329 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 U3KQA8 63 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 ADAMTS9Q9P2N4 1935 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 TNRC6BQ9UPQ9 1833 aaKnown RBP11.78□□□□□ -0.52
GABPB1-201ENST00000220429 A0A1W2PQM1 296 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 A0A1W2PRS3 328 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 DCDC2BA2VCK2 349 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 MT-ATP6P00846 226 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 CTSDP07339 412 aaPredicted RBP11.78□□□□□ -0.52
GABPB1-201ENST00000220429 IGLC2P0DOY2 106 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 IGLC3P0DOY3 106 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 COMPP49747 757 aaPredicted RBP11.78□□□□□ -0.52
GABPB1-201ENST00000220429 ACKR1Q16570 336 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 C1orf140Q5VVS0 124 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 TMEM225Q6GV28 225 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 ANKRD37Q7Z713 158 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 NFAM1Q8NET5 270 aaPredicted RBP11.78□□□□□ -0.52
GABPB1-201ENST00000220429 AMELYQ99218 206 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 GPR84Q9NQS5 396 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 SIT1Q9Y3P8 196 aa11.78□□□□□ -0.52
GABPB1-201ENST00000220429 TRAV34A0A0B4J273 112 aa11.77□□□□□ -0.52
GABPB1-201ENST00000220429 JMJD7P0C870 316 aa11.77□□□□□ -0.52
GABPB1-201ENST00000220429 CSNK1A1P48729 337 aa11.77□□□□□ -0.52
GABPB1-201ENST00000220429 FBXW4P57775 412 aa11.77□□□□□ -0.52
GABPB1-201ENST00000220429 SUMO1P63165 101 aaKnown RBP11.77□□□□□ -0.52
GABPB1-201ENST00000220429 RBPJQ06330 500 aa11.77□□□□□ -0.52
GABPB1-201ENST00000220429 OR4S2Q8NH73 311 aa11.77□□□□□ -0.52
GABPB1-201ENST00000220429 HIPK2Q9H2X6 1198 aa11.77□□□□□ -0.52
GABPB1-201ENST00000220429 FSCN3Q9NQT6 498 aa11.77□□□□□ -0.52
GABPB1-201ENST00000220429 LRP12Q9Y561 859 aa11.77□□□□□ -0.52
GABPB1-201ENST00000220429 C2orf72A6NCS6 295 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 H7BYZ3 331 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 DXOO77932 396 aaKnown RBP11.77□□□□□ -0.53
GABPB1-201ENST00000220429 HBE1P02100 147 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 STAG3L3P0CL85 134 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 GNB3P16520 340 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 GCH1P30793 250 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 LGALS7P47929 136 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 RPL27P61353 136 aaKnown RBP11.77□□□□□ -0.53
GABPB1-201ENST00000220429 ADIRFQ15847 76 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 VAX1Q5SQQ9 334 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 NIT1Q86X76 327 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 ZNF519Q8TB69 540 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 FOXN4Q96NZ1 517 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 HSPB9Q9BQS6 159 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 LPAR5Q9H1C0 372 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 EHFQ9NZC4 300 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 B9D1Q9UPM9 204 aa11.77□□□□□ -0.53
GABPB1-201ENST00000220429 PRSS37A4D1T9 235 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 XRCC2O43543 280 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 HRASP01112 189 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 TYMSP04818 313 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 CCL7P80098 99 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 KRTCAP3Q53RY4 240 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 LYSMD4Q5XG99 296 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 OR4D6Q8NGJ1 314 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 FAM46BQ96A09 425 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 C4orf45Q96LM5 186 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 CALHM2Q9HA72 323 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 SLC35D1Q9NTN3 355 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 GNG13Q9P2W3 67 aa11.76□□□□□ -0.53
GABPB1-201ENST00000220429 SMPXQ9UHP9 88 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms