RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 MSMPQ1L6U9 139 aa25.05■■□□□ 1.6
PABPN1-201ENST00000216727 CCL28Q9NRJ3 127 aa25.05■■□□□ 1.6
PABPN1-201ENST00000216727 CEP295Q9C0D2 2601 aa25.04■■□□□ 1.6
PABPN1-201ENST00000216727 WNT9BO14905 357 aa25.04■■□□□ 1.6
PABPN1-201ENST00000216727 GFRA3O60609 400 aa25.04■■□□□ 1.6
PABPN1-201ENST00000216727 CD200P41217 278 aa25.04■■□□□ 1.6
PABPN1-201ENST00000216727 MRGPRGQ86SM5 289 aa25.04■■□□□ 1.6
PABPN1-201ENST00000216727 ZFP57Q9NU63 452 aa25.04■■□□□ 1.6
PABPN1-201ENST00000216727 PTBP3O95758 552 aaKnown RBP25.03■■□□□ 1.6
PABPN1-201ENST00000216727 FAM219AQ8IW50 185 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 CYTL1Q9NRR1 136 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 DMXL2Q8TDJ6 3036 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 hCG_1807616A0A1W2PRN6 198 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 PSPNO60542 156 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 FAM27E3Q08E93 113 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 HMGN3Q15651 99 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 ALKBH2Q6NS38 261 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 SLC35G3Q8N808 338 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 CXorf58Q96LI9 332 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 UFSP2Q9NUQ7 469 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 ZNF835Q9Y2P0 537 aa25.03■■□□□ 1.6
PABPN1-201ENST00000216727 UBE2J1Q9Y385 318 aaPredicted RBP25.03■■□□□ 1.6
PABPN1-201ENST00000216727 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP25.02■■□□□ 1.6
PABPN1-201ENST00000216727 IFNL4K9M1U5 179 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 AANATQ16613 207 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 SMIM21Q3B7S5 101 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 TMEM268Q5VZI3 342 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 BVESQ8NE79 360 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 IL1F10Q8WWZ1 152 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 DMRTA2Q96SC8 542 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 DUSP13Q9UII6 198 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 MAP1BP46821 2468 aaKnown RBP25.02■■□□□ 1.6
PABPN1-201ENST00000216727 A0A0G2JNJ9 132 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 HSD17B6O14756 317 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 TPT1P13693 172 aaKnown RBP25.02■■□□□ 1.6
PABPN1-201ENST00000216727 CEBPDP49716 269 aaPredicted RBP25.02■■□□□ 1.6
PABPN1-201ENST00000216727 GFRALQ6UXV0 394 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 MEX3BQ6ZN04 569 aaKnown RBP25.02■■□□□ 1.6
PABPN1-201ENST00000216727 LRP11Q86VZ4 500 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 FOXRED2Q8IWF2 684 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 OR2Z1Q8NG97 314 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 USB1Q9BQ65 265 aaKnown RBP25.02■■□□□ 1.6
PABPN1-201ENST00000216727 Q9UFV3 132 aa25.02■■□□□ 1.6
PABPN1-201ENST00000216727 ERRFI1Q9UJM3 462 aaPredicted RBP25.02■■□□□ 1.6
PABPN1-201ENST00000216727 BSNQ9UPA5 3926 aa25.01■■□□□ 1.59
PABPN1-201ENST00000216727 TMEM30CPA0ZSE6 113 aa25.01■■□□□ 1.59
PABPN1-201ENST00000216727 CDS2O95674 445 aa25.01■■□□□ 1.59
PABPN1-201ENST00000216727 MBPP02686 304 aaPredicted RBP25.01■■□□□ 1.59
PABPN1-201ENST00000216727 HKR1P10072 659 aa25.01■■□□□ 1.59
PABPN1-201ENST00000216727 SNTB1Q13884 538 aaKnown RBP25.01■■□□□ 1.59
PABPN1-201ENST00000216727 TOR2AQ5JU69 321 aa25.01■■□□□ 1.59
PABPN1-201ENST00000216727 RELL2Q8NC24 303 aaPredicted RBP25.01■■□□□ 1.59
PABPN1-201ENST00000216727 OR1A1Q9P1Q5 309 aa25.01■■□□□ 1.59
PABPN1-201ENST00000216727 RP1L1Q8IWN7 2480 aaPredicted RBP25.01■■□□□ 1.59
PABPN1-201ENST00000216727 DUXBA0A1W2PPF3 345 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 UCP1P25874 307 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 S100GP29377 79 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 KLF3P57682 345 aaPredicted RBP25■■□□□ 1.59
PABPN1-201ENST00000216727 SLC35E4Q6ICL7 350 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 REG4Q9BYZ8 158 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 IGLV3-9A0A075B6K5 115 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 TRAV39A0A0B4J263 110 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 PGLYRP1O75594 196 aaPredicted RBP25■■□□□ 1.59
PABPN1-201ENST00000216727 WNT2P09544 360 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 BAP18Q8IXM2 172 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 OR10V1Q8NGI7 309 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 TMEM171Q8WVE6 324 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 ELOVL5Q9NYP7 299 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 PFDN2Q9UHV9 154 aa25■■□□□ 1.59
PABPN1-201ENST00000216727 LSM5Q9Y4Y9 91 aaKnown RBP25■■□□□ 1.59
PABPN1-201ENST00000216727 MFSD2BA6NFX1 497 aa24.99■■□□□ 1.59
PABPN1-201ENST00000216727 H0Y980 276 aa24.99■■□□□ 1.59
PABPN1-201ENST00000216727 TAAR5O14804 337 aa24.99■■□□□ 1.59
PABPN1-201ENST00000216727 P2RX3P56373 397 aa24.99■■□□□ 1.59
PABPN1-201ENST00000216727 RPS23P62266 143 aaKnown RBP24.99■■□□□ 1.59
PABPN1-201ENST00000216727 TESK1Q15569 626 aa24.99■■□□□ 1.59
PABPN1-201ENST00000216727 ZNF695Q8IW36 515 aa24.99■■□□□ 1.59
PABPN1-201ENST00000216727 OR10Z1Q8NGY1 313 aa24.99■■□□□ 1.59
PABPN1-201ENST00000216727 TAF9BQ9HBM6 251 aa24.99■■□□□ 1.59
PABPN1-201ENST00000216727 A0A1B0GW55 424 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 K7EPK0 472 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 HEXAP06865 529 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 DUX4L2P0CJ85 424 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 DUX4L3P0CJ86 424 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 DUX4L4P0CJ87 422 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 DUX4L5P0CJ88 424 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 DUX4L6P0CJ89 424 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 DUX4L7P0CJ90 424 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 CFHR2P36980 270 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 SELENOHQ8IZQ5 122 aaKnown RBP24.98■■□□□ 1.59
PABPN1-201ENST00000216727 FAM71E2Q8N5Q1 922 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 RBPMSQ93062 196 aaKnown RBP24.98■■□□□ 1.59
PABPN1-201ENST00000216727 SNRNP40Q96DI7 357 aaKnown RBP24.98■■□□□ 1.59
PABPN1-201ENST00000216727 PLEKHA2Q9HB19 425 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 SDHAF2Q9NX18 166 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 DUX4Q9UBX2 424 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 E5RGE8 158 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 SCGB1D2O95969 90 aa24.98■■□□□ 1.59
PABPN1-201ENST00000216727 RPL12P30050 165 aaKnown RBP24.98■■□□□ 1.59
PABPN1-201ENST00000216727 FAM74A1Q5RGS3 127 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms