RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PCP4P48539 62 aa12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 HTRA3P83110 453 aa12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 NAAAQ02083 359 aa12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 ZNF273Q14593 569 aa12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 FBXO46Q6PJ61 603 aaPredicted RBP12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 RTN4RL1Q86UN2 441 aaPredicted RBP12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 LRRC29Q8WV35 223 aa12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 FAM206AQ9NX38 181 aa12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 TBL2Q9Y4P3 447 aaKnown RBP12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 THADAQ6YHU6 1953 aa12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 TRAV38-1A0A0B4J264 116 aa12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 KRTCAP3Q53RY4 240 aa12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 OTOSQ8NHW6 89 aa12.96□□□□□ -0.34
SPTLC2-201ENST00000216484 TRDCB7Z8K6 153 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 FOXC1Q12948 553 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 VN1R2Q8NFZ6 395 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 NCKAP5O14513 1909 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 UBE2V2Q15819 145 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 TCTN3Q6NUS6 607 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 OR1K1Q8NGR3 316 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 ALG14Q96F25 216 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 C4orf45Q96LM5 186 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 P2RX4Q99571 388 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 NPFFR1Q9GZQ6 430 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 ADAMTS5Q9UNA0 930 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 YIPF6Q96EC8 236 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 HDHD3Q9BSH5 251 aaPredicted RBP12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 SAP30LQ9HAJ7 183 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 LINC01553A4QN01 128 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 PMELP40967 661 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 SAPCD1Q5SSQ6 148 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 LEMD1Q68G75 181 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 PSMG3Q9BT73 122 aaPredicted RBP12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 CACNA1EQ15878 2313 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 SHANK1Q9Y566 2161 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 OR4D9Q8NGE8 314 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 PRR7Q8TB68 274 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 SOSTQ9BQB4 213 aa12.95□□□□□ -0.34
SPTLC2-201ENST00000216484 SUMO2P61956 95 aaKnown RBP12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 ZNF117Q03924 483 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 GUCA2BQ16661 112 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 ZNF774Q6NX45 483 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 Q7L0L9 218 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 LSM10Q969L4 123 aaKnown RBP12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 RHOVQ96L33 236 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 GNRHR2Q96P88 292 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 NEU1Q99519 415 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 TRAF4Q9BUZ4 470 aaPredicted RBP12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 TRBV23-1A0A0A0MS06 115 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 GVQW1Q8N7I0 195 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 RAB1CQ92928 201 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 CYSLTR2Q9NS75 346 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 H3BQ15 152 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 LOXL3P58215 753 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 CD81P60033 236 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 RGP1Q92546 391 aaPredicted RBP12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 SLC25A19Q9HC21 320 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 GPR35Q9HC97 309 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 SIRT7Q9NRC8 400 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 EPPINO95925 133 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 FCGR2BP31994 310 aaPredicted RBP12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 PSG6Q00889 435 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 FOXF1Q12946 379 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 ARRDC1-AS1Q9H2J1 176 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 PIK3C2AO00443 1686 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 TMEM189A5PLL7 270 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 TMEM189-UBE2V1I3L0A0 370 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 TMEM78Q5T7P6 136 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 FAHD1Q6P587 224 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 HARBI1Q96MB7 349 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 METTL26Q96S19 204 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 ZNF665Q9H7R5 613 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 GPR27Q9NS67 375 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 PRR13Q9NZ81 148 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 TANC2Q9HCD6 1990 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 TSPAN2O60636 221 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 UBALD2Q8IYN6 164 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 CXXC4Q9H2H0 198 aa12.94□□□□□ -0.34
SPTLC2-201ENST00000216484 CTAG2O75638 210 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 PYCR3Q53H96 274 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 C2orf83Q53S99 150 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 DDB2Q92466 427 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 LRRC37A3O60309 1634 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 RAB9AP51151 201 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 FOXO1Q12778 655 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 SLC17A5Q9NRA2 495 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 TEPPQ6URK8 271 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 MAP1LC3AQ9H492 121 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 MMP25Q9NPA2 562 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 PLA2G3Q9NZ20 509 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 MTCH2Q9Y6C9 303 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 ASCL5Q7RTU5 278 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 SPICQ8N5J4 248 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 LPAR2Q9HBW0 351 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 PLCE1Q9P212 2302 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 NXPH1P58417 271 aa12.93□□□□□ -0.34
SPTLC2-201ENST00000216484 PAXXQ9BUH6 204 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms