RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 ZP3P21754 424 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 STARD6P59095 220 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 IGSF11Q5DX21 431 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 SLC24A4Q8NFF2 622 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 OR10A7Q8NGE5 316 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 PGLYRP3Q96LB9 341 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 PCGF1Q9BSM1 259 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 ZNF665Q9H7R5 613 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 AKIRIN1Q9H9L7 192 aaPredicted RBP16.39■□□□□ 0.21
MBD3-201ENST00000156825 MED12Q93074 2177 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 C10orf35Q96D05 121 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 MRPS18AQ9NVS2 196 aaKnown RBP16.39■□□□□ 0.21
MBD3-201ENST00000156825 AURKAIP1Q9NWT8 199 aaPredicted RBP16.39■□□□□ 0.21
MBD3-201ENST00000156825 CLN8Q9UBY8 286 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 HMSDA8MTL9 139 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 ZNF441Q8N8Z8 693 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 ADIPOR1Q96A54 375 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 CCL13Q99616 98 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 MS4A5Q9H3V2 200 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 RNF122Q9H9V4 155 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 ABCA1O95477 2261 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 CLDN14O95500 239 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 FAM214BQ7L5A3 538 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 ATAD5Q96QE3 1844 aa16.39■□□□□ 0.21
MBD3-201ENST00000156825 CLDN34H7C241 214 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 RPL31P62899 125 aaKnown RBP16.38■□□□□ 0.21
MBD3-201ENST00000156825 COL10A1Q03692 680 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 C19orf57Q0VDD7 668 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 IL24Q13007 206 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 ETFRF1Q6IPR1 90 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 ANGPTL4Q9BY76 406 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 RGPD4Q7Z3J3 1758 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 TNS1Q9HBL0 1735 aaKnown RBP16.38■□□□□ 0.21
MBD3-201ENST00000156825 F5H697 171 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 LGALSLQ3ZCW2 172 aaPredicted RBP16.38■□□□□ 0.21
MBD3-201ENST00000156825 SH2D2AQ9NP31 389 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 GOLT1BQ9Y3E0 138 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 IGHV3-72A0A0B4J1Y9 119 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 F2RL2O00254 374 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 SPP1P10451 314 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 ERVS71-1P61550 626 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 HIST1H3AP68431 136 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 SURF2Q15527 256 aaPredicted RBP16.38■□□□□ 0.21
MBD3-201ENST00000156825 OR52L2PQ8NGH6 319 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 OR4P4Q8NGL7 312 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 THYN1Q9P016 225 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 PGA4P0DJD7 388 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 HTN1P15515 57 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 CEBPDP49716 269 aaPredicted RBP16.38■□□□□ 0.21
MBD3-201ENST00000156825 FAHD2BQ6P2I3 314 aaPredicted RBP16.38■□□□□ 0.21
MBD3-201ENST00000156825 FAHD2AQ96GK7 314 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 NPTNQ9Y639 398 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 RNASEKQ6P5S7 137 aaKnown RBP16.38■□□□□ 0.21
MBD3-201ENST00000156825 UQCC3Q6UW78 93 aa16.38■□□□□ 0.21
MBD3-201ENST00000156825 AMMECR1Q9Y4X0 333 aaPredicted RBP16.38■□□□□ 0.21
MBD3-201ENST00000156825 SH2D7A6NKC9 451 aaPredicted RBP16.37■□□□□ 0.21
MBD3-201ENST00000156825 DNPH1O43598 174 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 FGF5P12034 268 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 RBM11P57052 281 aaKnown RBP16.37■□□□□ 0.21
MBD3-201ENST00000156825 LINC00052Q96N35 136 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 MS4A18H0YCH9 400 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 GDF9O60383 454 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 ZNF250P15622 560 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 SNRPEP62304 92 aaKnown RBP16.37■□□□□ 0.21
MBD3-201ENST00000156825 MS4A18Q3C1V0 323 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 ABHD14BQ96IU4 210 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 CYB5R1Q9UHQ9 305 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 RPL36A-HNRNPH2H7BZ11 118 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 UCP2P55851 309 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 PSG5Q15238 335 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 FA2HQ7L5A8 372 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 GNG7O60262 68 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 HLA-GP17693 338 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 PRDX2P32119 198 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 KIR2DS2P43631 304 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 WDR31Q8NA23 367 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 OR10D4PQ8NGN7 298 aa16.37■□□□□ 0.21
MBD3-201ENST00000156825 ZP4Q12836 540 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 DNASE2BQ8WZ79 361 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 ADTRPQ96IZ2 230 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 PPP1R3EQ9H7J1 279 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 ELF5Q9UKW6 265 aaPredicted RBP16.36■□□□□ 0.21
MBD3-201ENST00000156825 RBFOX3A6NFN3 312 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 DNASE2O00115 360 aaPredicted RBP16.36■□□□□ 0.21
MBD3-201ENST00000156825 FCN1O00602 326 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 C9orf62Q8N4C0 152 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 KCNK17Q96T54 332 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 TMEM208Q9BTX3 173 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 RSRP1Q9BUV0 290 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 HLA-DQB1P01920 261 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 CD82P27701 267 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 SUMO1P63165 101 aaKnown RBP16.36■□□□□ 0.21
MBD3-201ENST00000156825 GGTLC2Q14390 218 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 ANGPTL6Q8NI99 470 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 RGP1Q92546 391 aaPredicted RBP16.36■□□□□ 0.21
MBD3-201ENST00000156825 FLYWCH2Q96CP2 140 aaKnown RBP16.36■□□□□ 0.21
MBD3-201ENST00000156825 NOL4LQ96MY1 436 aaPredicted RBP16.36■□□□□ 0.21
MBD3-201ENST00000156825 TMPRSS5Q9H3S3 457 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 SP9P0CG40 484 aa16.36■□□□□ 0.21
MBD3-201ENST00000156825 EWSR1Q01844 656 aaKnown RBP eCLIP16.36■□□□□ 0.219e-7■□□□□ 11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms