RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 OPN1MW3P0DN78 364 aa17.27■□□□□ 0.35
PPP1R3F-201ENST00000055335 PTGDSP41222 190 aa17.27■□□□□ 0.35
PPP1R3F-201ENST00000055335 NABP1Q96AH0 204 aa17.27■□□□□ 0.35
PPP1R3F-201ENST00000055335 ZNF501Q96CX3 271 aaPredicted RBP17.27■□□□□ 0.35
PPP1R3F-201ENST00000055335 HS3ST1O14792 307 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 DFFBO76075 338 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 CCL2P13500 99 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 MSX1P28360 303 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 HNRNPKP61978 463 aaKnown RBP eCLIP17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 LHFPL2Q6ZUX7 228 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 FAM185AQ8N0U4 392 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 SIGLEC12Q96PQ1 595 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 B4DEV8 164 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 GALR1P47211 349 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 KCNMB1Q16558 191 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 HIST3H3Q16695 136 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 NFAM1Q8NET5 270 aaPredicted RBP17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 RASL10BQ96S79 203 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 SLC39A9Q9NUM3 307 aa17.26■□□□□ 0.35
PPP1R3F-201ENST00000055335 MAP1LC3B2A6NCE7 125 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 SLC10A1Q14973 349 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 RDH5Q92781 318 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 RCC1LQ96I51 464 aaKnown RBP17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 MAP1LC3BQ9GZQ8 125 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 SLC22A20A6NK97 555 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 ZNF737O75373 536 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 IGLV3-1P01715 115 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 RBM11P57052 281 aaKnown RBP17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 BATFQ16520 125 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 HLA-BQ31612 363 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 CACNG5Q9UF02 275 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 PRSS50Q9UI38 385 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 LRP4O75096 1905 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 LMO7DNF2Z398 122 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 GALR2O43603 387 aaPredicted RBP17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 PSG2P11465 335 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 CD33P20138 364 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 ZNF726P1Q15940 193 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 OR1F12Q8NHA8 337 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 SLC25A22Q9H936 323 aa17.25■□□□□ 0.35
PPP1R3F-201ENST00000055335 RPL29P47914 159 aaKnown RBP17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 PAX9P55771 341 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 ID3Q02535 119 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 PNRC1Q12796 327 aaPredicted RBP17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 IL24Q13007 206 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 CST9LP1Q5W188 147 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 C2orf88Q9BSF0 95 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 NDUFAF3Q9BU61 184 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 COL4A2P08572 1712 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 A0A1B0GUS0 222 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 UBE2L5PA0A1B0GUS4 154 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 ZNF705FA8MVS1 300 aaPredicted RBP17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 ZNF705DP0CH99 300 aaPredicted RBP17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 ZNF705BP0CI00 300 aaPredicted RBP17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 DEFA4P12838 97 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 ZNF25P17030 456 aaPredicted RBP17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 GZMHP20718 246 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 CTSSP25774 331 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 H1FOOQ8IZA3 346 aaPredicted RBP17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 GPR146Q96CH1 333 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 SPACA9Q96E40 222 aaPredicted RBP17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 TAAR3PQ9P1P4 343 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 A0A0U1RQK1 487 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 LRRC3CA6NJW4 275 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 BCL3P20749 454 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 CHRNA7P36544 502 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 FAM3BP58499 235 aaPredicted RBP17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 PMP22Q01453 160 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 EXT1Q16394 746 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 TCEAL6Q6IPX3 200 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 GATAD1Q8WUU5 269 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 PPP1R3CQ9UQK1 317 aa17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 PRRC2CQ9Y520 2896 aaKnown RBP17.24■□□□□ 0.35
PPP1R3F-201ENST00000055335 SCRG1O75711 98 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 UCP3P55916 312 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 BAXQ07812 192 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 ARL16Q0P5N6 197 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 BSXQ3C1V8 233 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 OR4F5Q8NH21 305 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 OR5R1Q8NH85 324 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 OR4F4Q96R69 305 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 C11orf1Q9H5F2 150 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 PSENENQ9NZ42 101 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 GPM6AP51674 278 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 PAX5Q02548 391 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 ZFP36L1Q07352 338 aaKnown RBP17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 TMEM241Q24JQ0 296 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 ZNF705AQ6ZN79 300 aaPredicted RBP17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 OR8G5Q8NG78 346 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 OR51B6Q9H340 312 aa17.23■□□□□ 0.35
PPP1R3F-201ENST00000055335 DVL1O14640 695 aa17.22■□□□□ 0.35
PPP1R3F-201ENST00000055335 NMSQ5H8A3 153 aa17.22■□□□□ 0.35
PPP1R3F-201ENST00000055335 FGFBP3Q8TAT2 258 aa17.22■□□□□ 0.35
PPP1R3F-201ENST00000055335 TMEM56Q96MV1 263 aa17.22■□□□□ 0.35
PPP1R3F-201ENST00000055335 UCK1Q9HA47 277 aa17.22■□□□□ 0.35
PPP1R3F-201ENST00000055335 CISD1Q9NZ45 108 aaKnown RBP17.22■□□□□ 0.35
PPP1R3F-201ENST00000055335 IL17BQ9UHF5 180 aa17.22■□□□□ 0.35
PPP1R3F-201ENST00000055335 ERRFI1Q9UJM3 462 aaPredicted RBP17.22■□□□□ 0.35
PPP1R3F-201ENST00000055335 KCNS2Q9ULS6 477 aa17.22■□□□□ 0.35
PPP1R3F-201ENST00000055335 R4GN57 208 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms