RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 C11orf53Q8IXP5 236 aa18.59■□□□□ 0.57
HOXC8-201ENST00000040584 FBXL14Q8N1E6 418 aa18.59■□□□□ 0.57
HOXC8-201ENST00000040584 RNF126Q9BV68 326 aa18.59■□□□□ 0.57
HOXC8-201ENST00000040584 UFSP2Q9NUQ7 469 aa18.59■□□□□ 0.57
HOXC8-201ENST00000040584 PLEKHJ1Q9NW61 149 aa18.59■□□□□ 0.57
HOXC8-201ENST00000040584 PKDREJQ9NTG1 2253 aa18.59■□□□□ 0.57
HOXC8-201ENST00000040584 TRAPPC2LH3BP13 241 aa18.58■□□□□ 0.57
HOXC8-201ENST00000040584 LGALS8O00214 317 aa18.58■□□□□ 0.57
HOXC8-201ENST00000040584 IGHV1-46P01743 117 aa18.58■□□□□ 0.57
HOXC8-201ENST00000040584 MEX3BQ6ZN04 569 aaKnown RBP18.58■□□□□ 0.57
HOXC8-201ENST00000040584 ZNF826PQ6ZT77 177 aa18.58■□□□□ 0.57
HOXC8-201ENST00000040584 MARC2Q969Z3 335 aa18.58■□□□□ 0.57
HOXC8-201ENST00000040584 OR2V2Q96R30 315 aa18.58■□□□□ 0.57
HOXC8-201ENST00000040584 METTL8Q9H825 291 aaKnown RBP18.58■□□□□ 0.57
HOXC8-201ENST00000040584 COL12A1Q99715 3063 aa18.58■□□□□ 0.56
HOXC8-201ENST00000040584 A6NLC8 198 aa18.58■□□□□ 0.56
HOXC8-201ENST00000040584 PGAM2P15259 253 aa18.58■□□□□ 0.56
HOXC8-201ENST00000040584 CD200P41217 278 aa18.58■□□□□ 0.56
HOXC8-201ENST00000040584 MZT1Q08AG7 82 aa18.58■□□□□ 0.56
HOXC8-201ENST00000040584 MST1LQ2TV78 715 aa18.58■□□□□ 0.56
HOXC8-201ENST00000040584 PIGYQ3MUY2 71 aa18.58■□□□□ 0.56
HOXC8-201ENST00000040584 RTN4RL2Q86UN3 420 aa18.58■□□□□ 0.56
HOXC8-201ENST00000040584 ZCCHC24Q8N2G6 241 aaKnown RBP18.58■□□□□ 0.56
HOXC8-201ENST00000040584 POM121Q96HA1 1249 aa18.58■□□□□ 0.56
HOXC8-201ENST00000040584 TLNRD1Q9H1K6 362 aa18.58■□□□□ 0.56
HOXC8-201ENST00000040584 FGF16O43320 207 aa18.57■□□□□ 0.56
HOXC8-201ENST00000040584 RBMXP38159 391 aaKnown RBP18.57■□□□□ 0.56
HOXC8-201ENST00000040584 RBM11P57052 281 aaKnown RBP18.57■□□□□ 0.56
HOXC8-201ENST00000040584 BAP18Q8IXM2 172 aa18.57■□□□□ 0.56
HOXC8-201ENST00000040584 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.57■□□□□ 0.56
HOXC8-201ENST00000040584 RNF141Q8WVD5 230 aa18.57■□□□□ 0.56
HOXC8-201ENST00000040584 MEGF10Q96KG7 1140 aa18.57■□□□□ 0.56
HOXC8-201ENST00000040584 C1orf123Q9NWV4 160 aa18.57■□□□□ 0.56
HOXC8-201ENST00000040584 ZDHHC8Q9ULC8 765 aa18.57■□□□□ 0.56
HOXC8-201ENST00000040584 ST3GAL6Q9Y274 331 aa18.57■□□□□ 0.56
HOXC8-201ENST00000040584 POLDIP2Q9Y2S7 368 aa18.57■□□□□ 0.56
HOXC8-201ENST00000040584 SPTAN1Q13813 2472 aaKnown RBP18.57■□□□□ 0.56
HOXC8-201ENST00000040584 TAAR5O14804 337 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 GABRR1P24046 479 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 FGF12P61328 243 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 SUPT4H1P63272 117 aaKnown RBP18.56■□□□□ 0.56
HOXC8-201ENST00000040584 BTN1A1Q13410 526 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 DAZAP2Q15038 168 aaPredicted RBP18.56■□□□□ 0.56
HOXC8-201ENST00000040584 SLC9A3R2Q15599 337 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 EFNB3Q15768 340 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 TAF9Q16594 264 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 ITLN1Q8WWA0 313 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 CYYR1Q96J86 154 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 AQP10Q96PS8 301 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 DECR2Q9NUI1 292 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 ZNF581Q9P0T4 197 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 C17orf100A8MU93 164 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 GEMIN2O14893 280 aaKnown RBP18.56■□□□□ 0.56
HOXC8-201ENST00000040584 PTBP3O95758 552 aaKnown RBP18.56■□□□□ 0.56
HOXC8-201ENST00000040584 TNFAIP6P98066 277 aaPredicted RBP18.56■□□□□ 0.56
HOXC8-201ENST00000040584 FAM74A1Q5RGS3 127 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 MUC15Q8N387 334 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 RHOFQ9HBH0 211 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 IL36RNQ9UBH0 155 aa18.56■□□□□ 0.56
HOXC8-201ENST00000040584 KLF2Q9Y5W3 355 aaPredicted RBP18.56■□□□□ 0.56
HOXC8-201ENST00000040584 B9A039 149 aa18.55■□□□□ 0.56
HOXC8-201ENST00000040584 PRSS44E7EML9 344 aa18.55■□□□□ 0.56
HOXC8-201ENST00000040584 IFNA2P01563 188 aa18.55■□□□□ 0.56
HOXC8-201ENST00000040584 CTSDP07339 412 aaPredicted RBP18.55■□□□□ 0.56
HOXC8-201ENST00000040584 DTYMKP23919 212 aa18.55■□□□□ 0.56
HOXC8-201ENST00000040584 HOXA4Q00056 320 aaPredicted RBP18.55■□□□□ 0.56
HOXC8-201ENST00000040584 WDR82Q6UXN9 313 aa18.55■□□□□ 0.56
HOXC8-201ENST00000040584 CHD3Q12873 2000 aaKnown RBP18.55■□□□□ 0.56
HOXC8-201ENST00000040584 A0A1W2PPR1 153 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 ACAA1P09110 424 aaPredicted RBP18.54■□□□□ 0.56
HOXC8-201ENST00000040584 PGA5P0DJD9 388 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 PRKACAP17612 351 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 GLRA1P23415 457 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 TNFSF4P23510 183 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 ERVK11-1P61568 191 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 PDCD1Q15116 288 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 ANKRD55Q3KP44 614 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 EIF5AL1Q6IS14 154 aaKnown RBP18.54■□□□□ 0.56
HOXC8-201ENST00000040584 SGPP2Q8IWX5 399 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 NRIP2Q9BQI9 281 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 DYNLRB1Q9NP97 96 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 HRNRQ86YZ3 2850 aaPredicted RBP18.54■□□□□ 0.56
HOXC8-201ENST00000040584 SDCBPO00560 298 aaPredicted RBP18.54■□□□□ 0.56
HOXC8-201ENST00000040584 RPS2P15880 293 aaKnown RBP18.54■□□□□ 0.56
HOXC8-201ENST00000040584 IL15RAQ13261 267 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 MOGAT3Q86VF5 341 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 ZNF701Q9NV72 531 aaPredicted RBP18.54■□□□□ 0.56
HOXC8-201ENST00000040584 IL19Q9UHD0 177 aa18.54■□□□□ 0.56
HOXC8-201ENST00000040584 CACNA1DQ01668 2161 aa18.53■□□□□ 0.56
HOXC8-201ENST00000040584 CCL8P80075 99 aa18.53■□□□□ 0.56
HOXC8-201ENST00000040584 SWI5Q1ZZU3 235 aa18.53■□□□□ 0.56
HOXC8-201ENST00000040584 PXDC1Q5TGL8 231 aa18.53■□□□□ 0.56
HOXC8-201ENST00000040584 Q8IYB0 196 aa18.53■□□□□ 0.56
HOXC8-201ENST00000040584 FAM58AQ8N1B3 248 aa18.53■□□□□ 0.56
HOXC8-201ENST00000040584 POC1AQ8NBT0 407 aa18.53■□□□□ 0.56
HOXC8-201ENST00000040584 ANXA10Q9UJ72 324 aa18.53■□□□□ 0.56
HOXC8-201ENST00000040584 FAM90A10PA6NDY2 464 aa18.52■□□□□ 0.56
HOXC8-201ENST00000040584 FAM90A18PA6NE21 464 aa18.52■□□□□ 0.56
HOXC8-201ENST00000040584 FAM90A16PA6NEW6 464 aa18.52■□□□□ 0.56
HOXC8-201ENST00000040584 FAM90A20PA6NIJ5 464 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms