RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 VHLLQ6RSH7 139 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF511Q8NB15 262 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 JMJD8Q96S16 334 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 ZBP1Q9H171 429 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 MTCH2Q9Y6C9 303 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 J3KTA2 159 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 CDC14BO60729 498 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 CYB5R3P00387 301 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-201ENST00000011700 F11P03951 625 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 NGFRP08138 427 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 FOLR2P14207 255 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 NUTF2P61970 127 aaKnown RBP5.39□□□□□ -1.55
VPS13D-201ENST00000011700 TMEM88Q6PEY1 159 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 OR5M1Q8NGP8 315 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 PHF7Q9BWX1 381 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-201ENST00000011700 OR51B4Q9Y5P0 310 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 HCFC2Q9Y5Z7 792 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 CDC14CA4D256 554 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 H0Y980 276 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 OR2J3O76001 311 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 TSPAN7P41732 249 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 OLIG3Q7RTU3 272 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 DYRK2Q92630 601 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 SCNM1Q9BWG6 230 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF665Q9H7R5 613 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 ZMAT3Q9HA38 289 aaKnown RBP5.39□□□□□ -1.55
VPS13D-201ENST00000011700 TGIF2-C20orf24A0A0A6YYL0 155 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 A0A1W2PR48 441 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 OR2W5A6NFC9 320 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF385BQ569K4 471 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 OR5A2Q8NGI9 324 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 MCHR2Q969V1 340 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 ADAT3Q96EY9 351 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-201ENST00000011700 METTL26Q96S19 204 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 GPR35Q9HC97 309 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 HSF4Q9ULV5 492 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 LINC00587B1AMM8 73 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 BCL2P10415 239 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 KCNMB1Q16558 191 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF600Q6ZNG1 722 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 OR10V1Q8NGI7 309 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 PTP4A1Q93096 173 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 HHIPQ96QV1 700 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 KCNE5Q9UJ90 142 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 ATP23Q9Y6H3 246 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 TCRBV5S2A0A599 114 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 PIAS2O75928 621 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 CRHP06850 196 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 MVDP53602 400 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 LRRC75BQ2VPJ9 315 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 MARCH3Q86UD3 253 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 SAXO1Q8IYX7 474 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 OR4C3Q8NH37 302 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 ASB16Q96NS5 453 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 WDR13Q9H1Z4 485 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 NEU3Q9UQ49 428 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 PYCARD-AS1I3L0S3 204 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 NGFP01138 241 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 C10orf113Q5VZT2 155 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 OR5M10Q6IEU7 315 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 JKAMPQ9P055 326 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 DOK5Q9P104 306 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 OPN4Q9UHM6 478 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 DOPEY1Q5JWR5 2465 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 A0A0G2JMZ2 1700 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 LRRC37A2A6NM11 1700 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 TANC1Q9C0D5 1861 aa5.39□□□□□ -1.55
VPS13D-201ENST00000011700 GAGE10A6NGK3 116 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 INO80CQ6PI98 192 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 RNF122Q9H9V4 155 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 RNF186Q9NXI6 227 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 AKR7A2O43488 359 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 ZFPL1O95159 310 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 FAM157CP0CG43 387 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 SLC37A1P57057 533 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 ARL6IP6Q8N6S5 226 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 MRPL24Q96A35 216 aaKnown RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF253O75346 499 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 GYPAP02724 150 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 SUCLG1P53597 346 aaKnown RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF260Q3ZCT1 412 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 OR8I2Q8N0Y5 310 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 OR8B3Q8NGG8 313 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 OR8B2Q96RD0 313 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 IMMP2LQ96T52 175 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 MRPL13Q9BYD1 178 aaKnown RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 BRWD3Q6RI45 1802 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 RHBDL1O75783 438 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 PCBP3P57721 371 aaKnown RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 C1orf61Q13536 156 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 ZNF77Q15935 545 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 HLA-DRB5Q30154 266 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 KHDC1LQ5JSQ8 128 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 LAMTOR1Q6IAA8 161 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 CGB2Q6NT52 195 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 FAM103A1Q9BTL3 118 aaKnown RBP5.38□□□□□ -1.55
VPS13D-201ENST00000011700 GP6Q9HCN6 339 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 TNFSF12O43508 249 aa5.38□□□□□ -1.55
VPS13D-201ENST00000011700 HLA-DRB1P01911 266 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms