RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 LYRM2Q9NU23 88 aaPredicted RBP9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 GNG13Q9P2W3 67 aa9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 FOXD3Q9UJU5 478 aaPredicted RBP9.06□□□□□ -0.96
CX3CL1-201ENST00000006053 SMCO3A2RU48 225 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 BCAT2O15382 392 aaPredicted RBP9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST1H2BKO60814 126 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 TMEM50AO95807 157 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST1H2BJP06899 126 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST1H2BOP23527 126 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST1H2BBP33778 126 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 RBM11P57052 281 aaKnown RBP9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST1H2BDP58876 126 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST1H2BCP62807 126 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST2H2BEQ16778 126 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF468Q5VIY5 522 aaPredicted RBP9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF818PQ6ZRF7 136 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 C17orf78Q8N4C9 275 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF611Q8N823 705 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 CADM4Q8NFZ8 388 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 EXTL1Q92935 676 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST1H2BHQ93079 126 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST1H2BNQ99877 126 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HIST1H2BMQ99879 126 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 B4E171 279 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF587BE7ETH6 402 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 ZIC3O60481 467 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 SCTP09683 121 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 APLNRP35414 380 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 FUT6P51993 359 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 RAB11AP62491 216 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 SRPXP78539 464 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 R3HDM4Q96D70 268 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 PHF7Q9BWX1 381 aaPredicted RBP9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 C11orf1Q9H5F2 150 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 WDFY3Q8IZQ1 3526 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 CACNA1GO43497 2377 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 A0A087WZY1 265 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 OR5H1A6NKK0 313 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 ZFP92A6NM28 416 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 DKK1O94907 266 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 HLA-HP01893 362 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 TK1P04183 234 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 SOD3P08294 240 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 SPINK2P20155 84 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 CCNOP22674 350 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 NTF4P34130 210 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 CCL7P80098 99 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 PSG4Q00888 419 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 CLN3Q13286 438 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 TMEM211Q6ICI0 200 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 OR2T2Q6IF00 324 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 YRDCQ86U90 279 aaKnown RBP9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 FGFBP3Q8TAT2 258 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 CCL28Q9NRJ3 127 aa9.05□□□□□ -0.96
CX3CL1-201ENST00000006053 IGKV1D-13A0A0B4J2D9 117 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 M0R143 59 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 IGKV1-13P0DP09 117 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 LIFP15018 202 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 HOXC12P31275 282 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 IL2RGP31785 369 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 TLE4Q04727 773 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 RNF151Q2KHN1 245 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF664Q8N3J9 261 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 GNPNAT1Q96EK6 184 aaPredicted RBP9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 A0A1W2PQM1 296 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 IGHV3-9P01782 118 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 HSPB1P04792 205 aaKnown RBP9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 MDKP21741 143 aaPredicted RBP9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 DSCR4P56555 118 aaPredicted RBP9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF506Q5JVG8 444 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 ASCL4Q6XD76 172 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 WDR5BQ86VZ2 330 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 ODF3L1Q8IXM7 274 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 CLDND2Q8NHS1 167 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 PACRGQ96M98 296 aaPredicted RBP9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 CALHM2Q9HA72 323 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 CBLN4Q9NTU7 201 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 TMEM38BQ9NVV0 291 aa9.04□□□□□ -0.96
CX3CL1-201ENST00000006053 MKRN2OSH3BPM6 223 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 HLA-DRB3P79483 266 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 MRPS11P82912 194 aaKnown RBP9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 TMEM267Q0VDI3 215 aaPredicted RBP9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 SLC10A1Q14973 349 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 IZUMO4Q1ZYL8 232 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 MPV17LQ2QL34 196 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 CEACAM16Q2WEN9 425 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 VHLLQ6RSH7 139 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 LCN15Q6UWW0 184 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 AAED1Q7RTV5 226 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 C22orf15Q8WYQ4 148 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 TMEM56Q96MV1 263 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 TMEM56-RWDD3S4R434 201 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 CACNA1HO95180 2353 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 hCG_38984A0A1B0GV85 526 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF732B4DXR9 585 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 PDGFBP01127 241 aaPredicted RBP9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 FGF7P21781 194 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 GLIPR1P48060 266 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 PCOLCEQ15113 449 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms