RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 NSUN5P2Q63ZY6 315 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 LIAT1Q6ZQX7 453 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 C17orf82Q86X59 251 aaPredicted RBP8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 PCNPQ8WW12 178 aaKnown RBP8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 ABHD1Q96SE0 405 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 ABHD14AQ9BUJ0 271 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 CCL28Q9NRJ3 127 aa8.96□□□□□ -0.97
NIPAL3-201ENST00000003912 FAM90A10PA6NDY2 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A18PA6NE21 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A16PA6NEW6 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A20PA6NIJ5 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A8PA6NJQ4 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A7PA6NKC0 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A22PA8MWA6 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A12PA8MX19 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A5PA8MXJ8 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A23PA8MXZ1 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A15PP0C7V4 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A13PP0C7W8 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A14PP0C7W9 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 FAM90A24PP0C7X0 464 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 M6PRP20645 277 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 GLRXP35754 106 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 SSTP61278 116 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 TMEM41BQ5BJD5 291 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 PHYHD1Q5SRE7 291 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 SLC25A42Q86VD7 318 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 WFDC6Q9BQY6 131 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 MRPL22Q9NWU5 206 aaKnown RBP8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 SLC45A2Q9UMX9 530 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 ZNF727A8MUV8 499 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 CD37P11049 281 aa8.96□□□□□ -0.98
NIPAL3-201ENST00000003912 TRAV39A0A0B4J263 110 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 ZNF320A2RRD8 509 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 VDAC1P21796 283 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 TAGLNQ01995 201 aaKnown RBP8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 EGR4Q05215 589 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 HIST2H3AQ71DI3 136 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 BOLA1Q9Y3E2 137 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 A0A0G2JMM0 328 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 A0A1W2PPB8 328 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 A0A1W2PRS3 328 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 KIR3DP1A8MWS1 328 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 NPIPB9F8W1W9 429 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 FOXH1O75593 365 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 SPINK9Q5DT21 86 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 FFAR4Q5NUL3 377 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 GAR1Q9NY12 217 aaKnown RBP8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 OR1A1Q9P1Q5 309 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 CHEK1O14757 476 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 OR2H2O95918 312 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 CPN1P15169 458 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 S100A4P26447 101 aaKnown RBP8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 MC5RP33032 325 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 KCNMB1Q16558 191 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 RPL7L1Q6DKI1 246 aaKnown RBP8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 UNQ6494/PRO21346Q6UXR6 183 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 TMEM91Q6ZNR0 172 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 ZNF826PQ6ZT77 177 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 OR5B3Q8NH48 314 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 WDYHV1Q96HA8 205 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 RNF2Q99496 336 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 H7BYZ3 331 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 PPP1CCP36873 323 aaKnown RBP8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 SLC35B1P78383 322 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 DUSP18Q8NEJ0 188 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 OR1L8Q8NGR8 309 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 RNASE6Q93091 150 aaKnown RBP8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 AICDAQ9GZX7 198 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 Q9N2K0 584 aa8.95□□□□□ -0.98
NIPAL3-201ENST00000003912 KLF7O75840 302 aaPredicted RBP8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 CD40P25942 277 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 PAX6P26367 422 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 LYZP61626 148 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 SNAI3Q3KNW1 292 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 ZNF260Q3ZCT1 412 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 NRN1LQ496H8 165 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 HOGA1Q86XE5 327 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 SAXO1Q8IYX7 474 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 OR2C3Q8N628 320 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 LILRB4Q8NHJ6 448 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 BCL2L2Q92843 193 aaPredicted RBP8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 RPUSD4Q96CM3 377 aaKnown RBP8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 CXorf58Q96LI9 332 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 TMEM231Q9H6L2 316 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 PITPNC1Q9UKF7 332 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 C20orf202A1L168 122 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 SYNGR2O43760 224 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 CYB5R3P00387 301 aaPredicted RBP8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 ENDOGQ14249 297 aaKnown RBP8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 TBR1Q16650 682 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 BTNL8Q6UX41 500 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 OR10A7Q8NGE5 316 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 OR5C1Q8NGR4 320 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 NEU4Q8WWR8 484 aaPredicted RBP8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 AMELYQ99218 206 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 RHOFQ9HBH0 211 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 PDCD11Q14690 1871 aaKnown RBP8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 SVILO95425 2214 aa8.94□□□□□ -0.98
NIPAL3-201ENST00000003912 PPIAL4CA0A0B4J2A2 164 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms