RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Xlr4bQ9JJQ7 215 aa18.18■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Tbl1xQ9QXE7 527 aa18.18■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Olfr557E9Q550 322 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 SrcP05480 541 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Rps27aP62983 156 aaKnown RBP18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Adra2cQ01337 458 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Hes3Q61657 175 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Rcc2Q8BK67 520 aaKnown RBP18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Ppp1r14cQ8R4S0 164 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Olfr995Q8VF74 315 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Olfr993Q8VF75 314 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Olfr339Q8VGK8 309 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Wasf3Q8VHI6 501 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Mrpl15Q9CPR5 295 aaKnown RBP18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Q9DAE8 263 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Rp2Q9EPK2 347 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Kcne4Q9WTW3 170 aa18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Suclg1Q9WUM5 346 aaKnown RBP18.17■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Adam6aB2RSY5 754 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Vmn1r58G3X9U3 310 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Olfr1564K7N6V7 318 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 NlkO54949 527 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Cd1d1P11609 336 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Cd1d2P11610 336 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Ccr8P56484 353 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Mpc1P63030 109 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 D330020A13RikQ8C799 211 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Vmn1r19Q8R2C7 308 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Alg12Q8VDB2 486 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Olfr507Q8VG13 316 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Olfr1240Q8VG73 314 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Vmn1r48Q9EQ52 302 aa18.16■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Gm42543A0A0G2JET4 117 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Gm45844A0A1B0GRQ2 137 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Gm13178B1AVU7 408 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 H2-DMaP28078 261 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 GipP48756 144 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Rasl12Q08AT1 266 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Q3UZV7 1028 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Fam57aQ5ND56 257 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Sntb2Q61235 520 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Zfp82Q6P9Y7 530 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Olfr469Q8VF66 314 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Olfr837Q8VFJ4 312 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Fyttd1Q91Z49 317 aaKnown RBP18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Vgll1Q99NC0 307 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Vmn1r171Q9EPS6 316 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 C1galt1c1Q9JMG2 316 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Olfr1438-ps1A0A140LHS9 319 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Ankrd29D3YVV3 309 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Gfra3O35118 397 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 AanatO88816 205 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Rac2Q05144 192 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Repin1Q5U4E2 545 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Zfp455Q7M6X9 461 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Znf250Q7TNU6 535 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Olfr1101Q7TR59 310 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Lix1lQ8BQ89 337 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Aifm2Q8BUE4 373 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Slc25a42Q8R0Y8 318 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Tmem242Q8VCR3 140 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Xrcc2Q9CX47 278 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 Wbp2nlQ9D529 359 aa18.15■□□□□ 0.5
Ccdc88a-202ENSMUST00000109477 CatsperdE9Q9F6 805 aa18.14■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 H2-T10F6T1I5 379 aa18.14■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Vmn2r82G3UWA2 865 aa18.14■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Olfr125Q14AJ9 320 aa18.14■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Prss46Q5M8S2 314 aa18.14■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Slc25a47Q6IS41 310 aa18.14■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Zfp189Q8BKP2 608 aa18.14■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Ubac2Q8R1K1 345 aa18.14■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Yif1aQ91XB7 293 aa18.14■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Trappc2Q9CQP2 140 aa18.14■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Crybb1Q9WVJ5 250 aa18.14■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Gm12789B1AUV7 164 aa18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Gm9493F6SVV1 192 aaKnown RBP18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Nat2P50295 290 aa18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 ActbP60710 375 aa18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Actg1P63260 375 aaKnown RBP18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 BidP70444 195 aa18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Mapk3Q63844 380 aa18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Slc46a1Q6PEM8 459 aa18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Olfr93Q6UAH1 312 aa18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Stfa2l1Q8BWM3 103 aa18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Vash1Q8C1W1 375 aa18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Bcl3Q9Z2F6 448 aa18.13■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Ighv5-4A0A075B5P9 117 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Gm15080A2BI02 449 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Gm10376D3YXI8 184 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Sult2a3D3Z1W5 285 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Gm3676D3Z236 184 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Olfr914E9PW59 316 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Olfr251E9Q891 316 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Gm21833J3QPK1 500 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Gm10375L7N286 184 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Gm3573L7N292 184 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 TectbO08524 329 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Diras2Q5PR73 199 aa18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Eri1Q7TMF2 345 aaKnown RBP18.12■□□□□ 0.49
Ccdc88a-202ENSMUST00000109477 Rnf144bQ8BKD6 301 aa18.12■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms