RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	NAA10	P41227	235 aa	Predicted RBP	5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	OMP	P47874	163 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	SRP9	P49458	86 aa	Known RBP	5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	HILS1	P60008	231 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	LCN6	P62502	163 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	PSG7	Q13046	419 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	MOGAT2	Q3SYC2	334 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	AVPI1	Q5T686	147 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	TBPL2	Q6SJ96	375 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	FBXW12	Q6X9E4	464 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	RBMS3	Q6XE24	437 aa	Known RBP	5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	PGAM4	Q8N0Y7	254 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	FGFRL1	Q8N441	504 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	BPIFB2	Q8N4F0	458 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	ZNF283	Q8N7M2	679 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	CLDN22	Q8N7P3	220 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	OR2Z1	Q8NG97	314 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	OR10H4	Q8NGA5	316 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	OR52L1	Q8NGH7	329 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	OR51L1	Q8NGJ5	315 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	OR4C15	Q8NGM1	316 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	OR4D5	Q8NGN0	318 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	OR13G1	Q8NGZ3	307 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	CCDC107	Q8WV48	283 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	C10orf35	Q96D05	121 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	CMBL	Q96DG6	245 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	ZMYND19	Q96E35	227 aa	Predicted RBP	5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	PYURF	Q96I23	114 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	S1PR3	Q99500	378 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	NEURL2	Q9BR09	285 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	HIPK2	Q9H2X6	1198 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	RERGL	Q9H628	205 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	NTN4	Q9HB63	628 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	ZFP57	Q9NU63	452 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	TMEM106B	Q9NUM4	274 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	GNG12	Q9UBI6	72 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	PPP1R3C	Q9UQK1	317 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	EXOG	Q9Y2C4	368 aa	Known RBP	5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	KLHDC2	Q9Y2U9	406 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	IER3IP1	Q9Y5U9	82 aa		5.14	□□□□□ -1.59
CASC19-238	ENST00000641523	TRBV4-1	A0A0J9YWV2	114 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	OR10H3	O60404	316 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	FSTL3	O95633	263 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	FABP3	P05413	133 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	ZNF26	P17031	533 aa	Predicted RBP	5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	HOXB6	P17509	224 aa	Known RBP	5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	BTG1	P62324	171 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	ACTG1	P63261	375 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	RFX4	Q33E94	735 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	C12orf54	Q6X4T0	127 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	H2BFWT	Q7Z2G1	175 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	OR4D6	Q8NGJ1	314 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	SPTSSA	Q969W0	71 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	PLEKHA8	Q96JA3	519 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	ERMAP	Q96PL5	475 aa	Predicted RBP	5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	SLC22A4	Q9H015	551 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	FAM107B	Q9H098	131 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	IL1RAP	Q9NPH3	570 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	OR5V1	Q9UGF6	321 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	ARL2BP	Q9Y2Y0	163 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523	PCDHGB1	Q9Y5G3	927 aa		5.13	□□□□□ -1.59
CASC19-238	ENST00000641523		A8MXK9	166 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	RER1	O15258	196 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	GAPDH	P04406	335 aa	Known RBP	5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	ZNF823	P16415	610 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	CD40LG	P29965	261 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	LINC00205	P59089	165 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	PLP1	P60201	277 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	HIST1H3A	P68431	136 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	TSPAN31	Q12999	210 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	KCNJ8	Q15842	424 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	ZNF181	Q2M3W8	571 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	HIST2H3PS2	Q5TEC6	136 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	SLX4IP	Q5VYV7	408 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	OR4A47	Q6IF82	309 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	FAM71F2	Q6NXP2	309 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	C1orf94	Q6P1W5	598 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	LEG1	Q6P5S2	330 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	BTNL3	Q6UXE8	466 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	C17orf107	Q6ZR85	190 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	C19orf35	Q6ZS72	473 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	HIST2H3A	Q71DI3	136 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	LRRC28	Q86X40	367 aa	Predicted RBP	5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	KLHDC1	Q8N7A1	406 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	POC1A	Q8NBT0	407 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	TMEM104	Q8NE00	496 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	SLC26A10	Q8NG04	563 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	OR8G5	Q8NG78	346 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	OR1L6	Q8NGR2	347 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	OR2T4	Q8NH00	348 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	GNPDA2	Q8TDQ7	276 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	GTF3A	Q92664	365 aa	Known RBP	5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	OR2V2	Q96R30	315 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	ATF6B	Q99941	703 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	OR52D1	Q9H346	318 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	PATZ1	Q9HBE1	687 aa	Known RBP	5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	CLEC5A	Q9NY25	188 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	TECR	Q9NZ01	308 aa	Known RBP	5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	BAIAP2	Q9UQB8	552 aa		5.12	□□□□□ -1.59
CASC19-238	ENST00000641523	STARD10	Q9Y365	291 aa		5.12	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms