RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 ISPDA4D126 451 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 TMEM235A6NFC5 223 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 C22orf46C9J442 243 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 NDUFB3O43676 98 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 GSTZ1O43708 216 aaPredicted RBP7.53□□□□□ -1.2
SCARB2-225ENST00000640900 ECDO95905 644 aaPredicted RBP7.53□□□□□ -1.2
SCARB2-225ENST00000640900 DTYMKP23919 212 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 ZFP36P26651 326 aaKnown RBP7.53□□□□□ -1.2
SCARB2-225ENST00000640900 S100A5P33763 92 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 DLX6P56179 175 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 MRPS10P82664 201 aaKnown RBP7.53□□□□□ -1.2
SCARB2-225ENST00000640900 PITPNAQ00169 270 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 ZNF45Q02386 682 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 MEF2CQ06413 473 aaPredicted RBP7.53□□□□□ -1.2
SCARB2-225ENST00000640900 SCN1BQ07699 218 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 GRK1Q15835 563 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 LRRC10Q5BKY1 277 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 ATAD3CQ5T2N8 411 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 PYHIN1Q6K0P9 492 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 NLRC3Q7RTR2 1065 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 ZNF554Q86TJ5 538 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 IZUMO1Q8IYV9 350 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 C11orf42Q8N5U0 333 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 OR4M2Q8NGB6 313 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 Q96MF0 132 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 DCTN5Q9BTE1 182 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 CHST6Q9GZX3 395 aa7.53□□□□□ -1.2
SCARB2-225ENST00000640900 ZMAT3Q9HA38 289 aaKnown RBP7.53□□□□□ -1.2
SCARB2-225ENST00000640900 RPUSD1Q9UJJ7 312 aaKnown RBP7.53□□□□□ -1.2
SCARB2-225ENST00000640900 ARHGAP32A7KAX9 2087 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 TMEM30CPA0ZSE6 113 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 UBE2QL1A1L167 161 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 MEIOCA2RUB1 952 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 FABP12A6NFH5 140 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 CYSRT1A8MQ03 144 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 FAM25AB3EWG3 89 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 FAM25CB3EWG5 89 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 FAM25GB3EWG6 89 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 FAM157AC9JC47 383 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 NPIPB11E5RHQ5 1161 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 C15orf65H3BRN8 121 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 GABARAPH6UMI1 98 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 H7C1Q1 480 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 PTHLHP12272 177 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 TALDO1P37837 337 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 GLIPR1P48060 266 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 AESQ08117 197 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 KRBOX4Q5JUW0 171 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 NKAPLQ5M9Q1 402 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 TMEM200BQ69YZ2 307 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 SPNS3Q6ZMD2 512 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 DTX3Q8N9I9 347 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 ASCC1Q8N9N2 400 aaKnown RBP7.52□□□□□ -1.21
SCARB2-225ENST00000640900 TMEM185AQ8NFB2 350 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 SMIM4Q8WVI0 70 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 RAB39BQ96DA2 213 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 HDHD3Q9BSH5 251 aaPredicted RBP7.52□□□□□ -1.21
SCARB2-225ENST00000640900 SSBP3Q9BWW4 388 aaPredicted RBP7.52□□□□□ -1.21
SCARB2-225ENST00000640900 SRRQ9GZT4 340 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 Q9N2K0 584 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 C12orf4Q9NQ89 552 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 ETAA1Q9NY74 926 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 LPAR3Q9UBY5 353 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 CLN8Q9UBY8 286 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 MTFP1Q9UDX5 166 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 OPN4Q9UHM6 478 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 KIF25Q9UIL4 384 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 LINC00312Q9Y6C7 94 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 KIAA2026Q5HYC2 2103 aa7.52□□□□□ -1.21
SCARB2-225ENST00000640900 HIVEP1P15822 2718 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 ACANP16112 2415 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 KIR2DS1A0A191URI9 304 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 FUOMA2VDF0 154 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 C17orf98A8MV24 154 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 HSPB6O14558 160 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 PHF1O43189 567 aaPredicted RBP7.51□□□□□ -1.21
SCARB2-225ENST00000640900 ORC5O43913 435 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 FOXH1O75593 365 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 DIRAS3O95661 229 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 RBP4P02753 201 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 LPLP06858 475 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 FCGR3AP08637 254 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 PRSS3P35030 304 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 RPL31P62899 125 aaKnown RBP7.51□□□□□ -1.21
SCARB2-225ENST00000640900 SSBP1Q04837 148 aaKnown RBP7.51□□□□□ -1.21
SCARB2-225ENST00000640900 ATXN7L3Q14CW9 347 aaPredicted RBP7.51□□□□□ -1.21
SCARB2-225ENST00000640900 HMGN3Q15651 99 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 C17orf58Q2M2W7 97 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 ESCO2Q56NI9 601 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 SPANXN2Q5MJ10 180 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 CD276Q5ZPR3 534 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 C1orf122Q6ZSJ8 110 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 BTN2A1Q7KYR7 527 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 GDPD3Q7L5L3 318 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 MOB1BQ7L9L4 216 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 HOGA1Q86XE5 327 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 GDPD1Q8N9F7 314 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 OR13A1Q8NGR1 328 aa7.51□□□□□ -1.21
SCARB2-225ENST00000640900 OR52I2Q8NH67 350 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms