RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 YIF1AO95070 293 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 UBE2KP61086 200 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 CTAG1AP78358 180 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 THNSL2Q86YJ6 484 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 TCEAL3Q969E4 200 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 THOC3Q96J01 351 aaKnown RBP12.53□□□□□ -0.4
SCARB2-221ENST00000640341 TRBV23-1A0A0A0MS06 115 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 RBFOX3A6NFN3 312 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 LRRC3CA6NJW4 275 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 RND3P61587 244 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 HERPUD1Q15011 391 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 TMEM211Q6ICI0 200 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 TCEAL6Q6IPX3 200 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 CMTM1Q8IZ96 169 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 CYB561D1Q8N8Q1 229 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 MTCH1Q9NZJ7 389 aa12.53□□□□□ -0.4
SCARB2-221ENST00000640341 ARGFXA6NJG6 315 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 SLC22A20A6NK97 555 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 LILRA1O75019 489 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 SERPINE2P07093 398 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF674Q2M3X9 581 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 PMS2CLQ68D20 193 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 TMEM42Q69YG0 159 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 WDR5BQ86VZ2 330 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 MKXQ8IYA7 352 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 ZNF100Q8IYN0 542 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 SELENOHQ8IZQ5 122 aaKnown RBP12.52□□□□□ -0.4
SCARB2-221ENST00000640341 IL22RA1Q8N6P7 574 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 PLEKHF2Q9H8W4 249 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 GNG13Q9P2W3 67 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 ERRFI1Q9UJM3 462 aaPredicted RBP12.52□□□□□ -0.4
SCARB2-221ENST00000640341 TCFL5Q9UL49 500 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 KCNS2Q9ULS6 477 aa12.52□□□□□ -0.4
SCARB2-221ENST00000640341 STRAPQ9Y3F4 350 aaKnown RBP12.52□□□□□ -0.4
SCARB2-221ENST00000640341 PRR14LQ5THK1 2151 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 A0A1W2PR80 420 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 ZNF503-AS2A6NEH8 195 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 C5orf52A6NGY3 159 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 H3BQ15 152 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 RPL36A-HNRNPH2H7BZ11 118 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 FABP1P07148 127 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 LCN15Q6UWW0 184 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 LYPD6BQ8NI32 183 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 PSMF1Q92530 271 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 PRDM6Q9NQX0 595 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 PPP1R3CQ9UQK1 317 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 FGF8P55075 233 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-221ENST00000640341 C20orf204Q6ZNR8 217 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 PPP1R32Q7Z5V6 425 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 KCNE4Q8WWG9 221 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 SCRT1Q9BWW7 348 aa12.52□□□□□ -0.41
SCARB2-221ENST00000640341 FGF23Q9GZV9 251 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-221ENST00000640341 COLQQ9Y215 455 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-221ENST00000640341 K7N7A8 449 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 NDUFA6P56556 154 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 RPS23P62266 143 aaKnown RBP12.51□□□□□ -0.41
SCARB2-221ENST00000640341 RPL23AP62750 156 aaKnown RBP12.51□□□□□ -0.41
SCARB2-221ENST00000640341 RAB1AP62820 205 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 EIF3IQ13347 325 aaKnown RBP12.51□□□□□ -0.41
SCARB2-221ENST00000640341 KIAA0141Q14154 515 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-221ENST00000640341 OR8B8Q15620 311 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 ZDHHC23Q8IYP9 409 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 OR1K1Q8NGR3 316 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 SPIN2AQ99865 258 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 SPIN2BQ9BPZ2 258 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 RSG1Q9BU20 258 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 PLA2G5P39877 138 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 DAZAP2Q15038 168 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-221ENST00000640341 LRTM2Q8N967 370 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 CCDC54Q8NEL0 328 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 RAB39BQ96DA2 213 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 SLC25A31Q9H0C2 315 aa12.51□□□□□ -0.41
SCARB2-221ENST00000640341 SLC34A2O95436 690 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 RAB5CP51148 216 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 RPS16P62249 146 aaKnown RBP12.5□□□□□ -0.41
SCARB2-221ENST00000640341 ARV1Q9H2C2 271 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 SH2D2AQ9NP31 389 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 MIOXQ9UGB7 285 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 A0A0G2JRQ6 117 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 HMGB3O15347 200 aaKnown RBP12.5□□□□□ -0.41
SCARB2-221ENST00000640341 WDR1O75083 606 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 PSG2P11465 335 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 MAGEA5P43359 124 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 RAB11AP62491 216 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 MPV17LQ2QL34 196 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 C4orf17Q53FE4 359 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 OR2B11Q5JQS5 317 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 OR2T2Q6IF00 324 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 TMEM105Q8N8V8 129 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 RNF122Q9H9V4 155 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 Q9N2K0 584 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 BOD1L1Q8NFC6 3051 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 IGKV1-6A0A0C4DH72 117 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 CDS2O95674 445 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 MMP7P09237 267 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-221ENST00000640341 METTL15P1P0C7V9 234 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 SELEP16581 610 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 CA6P23280 308 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 DCAF12Q5T6F0 453 aa12.5□□□□□ -0.41
SCARB2-221ENST00000640341 TIPARPQ7Z3E1 657 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms