RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 LBHQ53QV2 105 aaPredicted RBP17.64■□□□□ 0.41
PMS1-222ENST00000639501 ANKRD37Q7Z713 158 aa17.64■□□□□ 0.41
PMS1-222ENST00000639501 NECAP1Q8NC96 275 aa17.64■□□□□ 0.41
PMS1-222ENST00000639501 OR2M3Q8NG83 312 aa17.64■□□□□ 0.41
PMS1-222ENST00000639501 OR1P1Q8NH06 330 aa17.64■□□□□ 0.41
PMS1-222ENST00000639501 RNASEH2CQ8TDP1 164 aaKnown RBP17.64■□□□□ 0.41
PMS1-222ENST00000639501 C10orf35Q96D05 121 aa17.64■□□□□ 0.41
PMS1-222ENST00000639501 DDA1Q9BW61 102 aa17.64■□□□□ 0.41
PMS1-222ENST00000639501 MRPL37Q9BZE1 423 aaKnown RBP17.64■□□□□ 0.41
PMS1-222ENST00000639501 CISD1Q9NZ45 108 aaKnown RBP17.64■□□□□ 0.41
PMS1-222ENST00000639501 OR14J1Q9UGF5 321 aa17.64■□□□□ 0.41
PMS1-222ENST00000639501 MMP17Q9ULZ9 603 aa17.64■□□□□ 0.41
PMS1-222ENST00000639501 GUCA1AP43080 201 aaPredicted RBP17.63■□□□□ 0.41
PMS1-222ENST00000639501 PNRC1Q12796 327 aaPredicted RBP17.63■□□□□ 0.41
PMS1-222ENST00000639501 ZNF787Q6DD87 383 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 ABLIM2Q6H8Q1 611 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 GAPTQ8N292 157 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 BORCS8Q96FH0 119 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 SPIN2AQ99865 258 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 SPIN2BQ9BPZ2 258 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 TAAR3PQ9P1P4 343 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 LRFN1Q9P244 771 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 RNF115Q9Y4L5 304 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 IGKV1D-13A0A0B4J2D9 117 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 ZNF705GA8MUZ8 300 aaPredicted RBP17.63■□□□□ 0.41
PMS1-222ENST00000639501 CYTIPO60759 359 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 IGKV1-13P0DP09 117 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 MYF5P13349 255 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 NUTF2P61970 127 aaKnown RBP17.63■□□□□ 0.41
PMS1-222ENST00000639501 SRPXP78539 464 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 TLE1Q04724 770 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 BAXQ07812 192 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 CLN3Q13286 438 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 SHBQ15464 509 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 Q6ZS52 159 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 BEND4Q6ZU67 534 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 OR10A7Q8NGE5 316 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 ZNF442Q9H7R0 627 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 DKKL1Q9UK85 242 aa17.63■□□□□ 0.41
PMS1-222ENST00000639501 WDR87Q6ZQQ6 2873 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 TRAV1-1A0A0B4J248 108 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 A0A0G2JRQ6 117 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 PDCD6O75340 191 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 H3F3AP84243 136 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 CYB5R2Q6BCY4 276 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 C17orf82Q86X59 251 aaPredicted RBP17.62■□□□□ 0.41
PMS1-222ENST00000639501 DNASE2BQ8WZ79 361 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 IFNL4K9M1U5 179 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 TLX3O43711 291 aaPredicted RBP17.62■□□□□ 0.41
PMS1-222ENST00000639501 OPN1MWP04001 364 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 OPN1MW2P0DN77 364 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 OPN1MW3P0DN78 364 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 C10orf128Q5T292 105 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 ASCL4Q6XD76 172 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 RAB24Q969Q5 203 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 UCN2Q96RP3 112 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 TPSD1Q9BZJ3 242 aa17.62■□□□□ 0.41
PMS1-222ENST00000639501 ACTR3CQ9C0K3 210 aaPredicted RBP17.62■□□□□ 0.41
PMS1-222ENST00000639501 SRFP11831 508 aa17.61■□□□□ 0.41
PMS1-222ENST00000639501 GZMHP20718 246 aa17.61■□□□□ 0.41
PMS1-222ENST00000639501 IZUMO4Q1ZYL8 232 aa17.61■□□□□ 0.41
PMS1-222ENST00000639501 DPPA3Q6W0C5 159 aa17.61■□□□□ 0.41
PMS1-222ENST00000639501 H1FOOQ8IZA3 346 aaPredicted RBP17.61■□□□□ 0.41
PMS1-222ENST00000639501 TGOLN2O43493 480 aa17.61■□□□□ 0.41
PMS1-222ENST00000639501 CLEC12BQ2HXU8 276 aa17.61■□□□□ 0.41
PMS1-222ENST00000639501 NOL4LQ96MY1 436 aaPredicted RBP17.61■□□□□ 0.41
PMS1-222ENST00000639501 CLEC18AA5D8T8 446 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 OR7C1O76099 320 aaPredicted RBP17.6■□□□□ 0.41
PMS1-222ENST00000639501 CRYGSP22914 178 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 TUBG1P23258 451 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 MSX1P28360 303 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 MRPS34P82930 218 aaKnown RBP17.6■□□□□ 0.41
PMS1-222ENST00000639501 MALLQ13021 153 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 CNN3Q15417 329 aaKnown RBP17.6■□□□□ 0.41
PMS1-222ENST00000639501 PRAMEF20Q5VT98 475 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 CLEC18CQ8NCF0 446 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 TMEM54Q969K7 222 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 SPTSSAQ969W0 71 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 HIST1H2AAQ96QV6 131 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 SRD5A3Q9H8P0 318 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 FAM86C1Q9NVL1 165 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 IGLV3-32A0A0A0MS00 114 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 XKRY2A2RUG3 117 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 DHHO43323 396 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 ERVS71-1P61550 626 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 IL24Q13007 206 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 PRSS8Q16651 343 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 FOXL2NBQ6ZUU3 175 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 C16orf82Q7Z2V1 217 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 FGF21Q9NSA1 209 aa17.6■□□□□ 0.41
PMS1-222ENST00000639501 PTRH2Q9Y3E5 179 aaKnown RBP17.6■□□□□ 0.41
PMS1-222ENST00000639501 IGHV1OR21-1A0A087WYE8 117 aa17.59■□□□□ 0.41
PMS1-222ENST00000639501 SCTP09683 121 aa17.59■□□□□ 0.41
PMS1-222ENST00000639501 OR4A8P0C604 315 aa17.59■□□□□ 0.41
PMS1-222ENST00000639501 PATE4P0C8F1 98 aa17.59■□□□□ 0.41
PMS1-222ENST00000639501 TCN2P20062 427 aa17.59■□□□□ 0.41
PMS1-222ENST00000639501 NPBWR2P48146 333 aa17.59■□□□□ 0.41
PMS1-222ENST00000639501 RBM11P57052 281 aaKnown RBP17.59■□□□□ 0.41
PMS1-222ENST00000639501 HERPUD1Q15011 391 aa17.59■□□□□ 0.41
PMS1-222ENST00000639501 SLC25A24Q6NUK1 477 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms