RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 KLF14Q8TD94 323 aaPredicted RBP18.27■□□□□ 0.52
CLN6-224ENST00000638076 MARC2Q969Z3 335 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 GPHA2Q96T91 129 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 PLEKHA2Q9HB19 425 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 FBXL17Q9UF56 701 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 NSG2Q9Y328 171 aa18.27■□□□□ 0.52
CLN6-224ENST00000638076 UBE2J1Q9Y385 318 aaPredicted RBP18.27■□□□□ 0.52
CLN6-224ENST00000638076 H0YL77 283 aa18.27■□□□□ 0.51
CLN6-224ENST00000638076 TMEM33P57088 247 aa18.27■□□□□ 0.51
CLN6-224ENST00000638076 ERVK11-1P61568 191 aa18.27■□□□□ 0.51
CLN6-224ENST00000638076 EIF5AP63241 154 aaKnown RBP18.27■□□□□ 0.51
CLN6-224ENST00000638076 SRPXP78539 464 aa18.27■□□□□ 0.51
CLN6-224ENST00000638076 ZADH2Q8N4Q0 377 aa18.27■□□□□ 0.51
CLN6-224ENST00000638076 CCL28Q9NRJ3 127 aa18.27■□□□□ 0.51
CLN6-224ENST00000638076 HOXD4P09016 255 aaPredicted RBP18.26■□□□□ 0.51
CLN6-224ENST00000638076 HLA-DRB3P79483 266 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 ZNF169Q14929 603 aaPredicted RBP18.26■□□□□ 0.51
CLN6-224ENST00000638076 C1orf162Q8NEQ5 155 aaPredicted RBP18.26■□□□□ 0.51
CLN6-224ENST00000638076 PRSS33Q8NF86 280 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 OR4A4PQ8NGN8 299 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 USB1Q9BQ65 265 aaKnown RBP18.26■□□□□ 0.51
CLN6-224ENST00000638076 SMIM3Q9BZL3 60 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 MS4A7Q9GZW8 240 aaPredicted RBP18.26■□□□□ 0.51
CLN6-224ENST00000638076 AHRRA9YTQ3 701 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 SIRPB1O00241 398 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 OR2H2O95918 312 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 SELEP16581 610 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 OR8G1Q15617 311 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 BPIFCQ8NFQ6 507 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 PLSCR4Q9NRQ2 329 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 ZFP57Q9NU63 452 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 DKK4Q9UBT3 224 aa18.26■□□□□ 0.51
CLN6-224ENST00000638076 WDR1O75083 606 aa18.25■□□□□ 0.51
CLN6-224ENST00000638076 GRPP07492 148 aa18.25■□□□□ 0.51
CLN6-224ENST00000638076 PGA5P0DJD9 388 aa18.25■□□□□ 0.51
CLN6-224ENST00000638076 CEACAM1P13688 526 aa18.25■□□□□ 0.51
CLN6-224ENST00000638076 CLEC9AQ6UXN8 241 aa18.25■□□□□ 0.51
CLN6-224ENST00000638076 ZNF695Q8IW36 515 aa18.25■□□□□ 0.51
CLN6-224ENST00000638076 OR10J5Q8NHC4 309 aa18.25■□□□□ 0.51
CLN6-224ENST00000638076 BOD1Q96IK1 185 aa18.25■□□□□ 0.51
CLN6-224ENST00000638076 TMEM56Q96MV1 263 aa18.25■□□□□ 0.51
CLN6-224ENST00000638076 NRIP2Q9BQI9 281 aa18.25■□□□□ 0.51
CLN6-224ENST00000638076 TMEM56-RWDD3S4R434 201 aa18.25■□□□□ 0.51
CLN6-224ENST00000638076 NXPH2O95156 264 aa18.24■□□□□ 0.51
CLN6-224ENST00000638076 CXorf67Q86X51 503 aaPredicted RBP18.24■□□□□ 0.51
CLN6-224ENST00000638076 KIRREL1Q96J84 757 aa18.24■□□□□ 0.51
CLN6-224ENST00000638076 TINAGQ9UJW2 476 aa18.24■□□□□ 0.51
CLN6-224ENST00000638076 NKX2-6A6NCS4 301 aa18.24■□□□□ 0.51
CLN6-224ENST00000638076 ZNF705EA8MWA4 302 aaPredicted RBP18.24■□□□□ 0.51
CLN6-224ENST00000638076 SLC33A1O00400 549 aaPredicted RBP18.24■□□□□ 0.51
CLN6-224ENST00000638076 ST8SIA3O43173 380 aa18.24■□□□□ 0.51
CLN6-224ENST00000638076 CMTM1Q8IZ96 169 aa18.24■□□□□ 0.51
CLN6-224ENST00000638076 ZNF610Q8N9Z0 462 aa18.24■□□□□ 0.51
CLN6-224ENST00000638076 OR4D5Q8NGN0 318 aa18.24■□□□□ 0.51
CLN6-224ENST00000638076 ERGIC1Q969X5 290 aa18.24■□□□□ 0.51
CLN6-224ENST00000638076 OBP2BQ9NPH6 170 aa18.24■□□□□ 0.51
CLN6-224ENST00000638076 LPAR3Q9UBY5 353 aa18.24■□□□□ 0.51
CLN6-224ENST00000638076 TRAV39A0A0B4J263 110 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 RAB19A4D1S5 217 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 SIGLEC5O15389 551 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 TNFSF13O75888 250 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 JTBO76095 146 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 APOC3P02656 99 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 EIF5AL1Q6IS14 154 aaKnown RBP18.23■□□□□ 0.51
CLN6-224ENST00000638076 SELENOHQ8IZQ5 122 aaKnown RBP18.23■□□□□ 0.51
CLN6-224ENST00000638076 PLPPR1Q8TBJ4 325 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 IL1F10Q8WWZ1 152 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 NARS2Q96I59 477 aaKnown RBP18.23■□□□□ 0.51
CLN6-224ENST00000638076 OPN3Q9H1Y3 402 aaPredicted RBP18.23■□□□□ 0.51
CLN6-224ENST00000638076 TNFSF12O43508 249 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 GAPDHP04406 335 aaKnown RBP18.23■□□□□ 0.51
CLN6-224ENST00000638076 CECR9P0C854 216 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 MDH2P40926 338 aaKnown RBP18.23■□□□□ 0.51
CLN6-224ENST00000638076 ZNF324BQ6AW86 544 aaPredicted RBP18.23■□□□□ 0.51
CLN6-224ENST00000638076 CABLES2Q9BTV7 478 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 ZDHHC8Q9ULC8 765 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 PROCRQ9UNN8 238 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 OR2W1Q9Y3N9 320 aa18.23■□□□□ 0.51
CLN6-224ENST00000638076 CDS2O95674 445 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 UQCC3Q6UW78 93 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 H1FOOQ8IZA3 346 aaPredicted RBP18.22■□□□□ 0.51
CLN6-224ENST00000638076 ARL11Q969Q4 196 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 STARD4Q96DR4 205 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 BSCL2Q96G97 398 aaPredicted RBP18.22■□□□□ 0.51
CLN6-224ENST00000638076 TREM2Q9NZC2 230 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 PURGQ9UJV8 347 aaKnown RBP18.22■□□□□ 0.51
CLN6-224ENST00000638076 RCL1Q9Y2P8 373 aaKnown RBP18.22■□□□□ 0.51
CLN6-224ENST00000638076 TMEM210A6NLX4 147 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 MLNRO43193 412 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 FBXO24O75426 580 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 BTN1A1Q13410 526 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 RTP5Q14D33 572 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 ZNF146Q15072 292 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 ZNF497Q6ZNH5 498 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 OR8G5Q8NG78 346 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 LILRB1Q8NHL6 650 aaPredicted RBP18.22■□□□□ 0.51
CLN6-224ENST00000638076 ERRFI1Q9UJM3 462 aaPredicted RBP18.22■□□□□ 0.51
CLN6-224ENST00000638076 SPEF1Q9Y4P9 236 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 POMT1Q9Y6A1 747 aa18.22■□□□□ 0.51
CLN6-224ENST00000638076 GPR137BO60478 399 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms