RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 OR6C3Q9NZP0 311 aa14.21□□□□□ -0.13
PNKP-230ENST00000638016 PRKDCP78527 4128 aaKnown RBP14.21□□□□□ -0.13
PNKP-230ENST00000638016 A0A087X0M5 115 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 A0A1B0GX30 115 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 FAM90A22PA8MWA6 464 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 MYL12BO14950 172 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 MAS1P04201 325 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 CELP19835 753 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 FSTP19883 344 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 GNG10P50151 68 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 MED21Q13503 144 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 DIAPH2-AS1Q14236 149 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 YIF1BQ5BJH7 314 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 TPTE2P1Q5T6R2 138 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 OR52W1Q6IF63 320 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 RTN4RL2Q86UN3 420 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 ZNF596Q8TC21 504 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 CFHR4Q92496 578 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 IL36GQ9NZH8 169 aa14.2□□□□□ -0.14
PNKP-230ENST00000638016 BUB1B-PAK6H3BSN5 160 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 IL1AP01583 271 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 CSTBP04080 98 aaKnown RBP14.19□□□□□ -0.14
PNKP-230ENST00000638016 CSF1P09603 554 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 CD28P10747 220 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 AQP4P55087 323 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 WNT4P56705 351 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 C2orf68Q2NKX9 166 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 JAGN1Q8N5M9 183 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 NANOGP1Q8N7R0 232 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 DERL3Q96Q80 235 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 PLCXD1Q9NUJ7 323 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 PAK1IP1Q9NWT1 392 aaPredicted RBP14.19□□□□□ -0.14
PNKP-230ENST00000638016 IDI2-AS1Q9NZ38 188 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 PITPNC1Q9UKF7 332 aa14.19□□□□□ -0.14
PNKP-230ENST00000638016 A0A1W2PPE3 182 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 LEUTXA8MZ59 168 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 LY6LH3BQJ8 138 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 TOR1AO14656 332 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 GPX5O75715 221 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 VHLP40337 213 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 NHLRC3Q5JS37 347 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 ATAD3CQ5T2N8 411 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 FAM27D1Q5T7N8 215 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 WIPF2Q8TF74 440 aaPredicted RBP14.18□□□□□ -0.14
PNKP-230ENST00000638016 CCDC107Q8WV48 283 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 BARHL1Q9BZE3 327 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 PRSS22Q9GZN4 317 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 BANF2Q9H503 90 aa14.18□□□□□ -0.14
PNKP-230ENST00000638016 MRPS28Q9Y2Q9 187 aaKnown RBP14.18□□□□□ -0.14
PNKP-230ENST00000638016 NPIPB11E5RHQ5 1161 aa14.17□□□□□ -0.14
PNKP-230ENST00000638016 TAS2R43P59537 309 aa14.17□□□□□ -0.14
PNKP-230ENST00000638016 GLIPR1L1Q6UWM5 242 aa14.17□□□□□ -0.14
PNKP-230ENST00000638016 LYPD6Q86Y78 171 aa14.17□□□□□ -0.14
PNKP-230ENST00000638016 ZNF565Q8N9K5 539 aa14.17□□□□□ -0.14
PNKP-230ENST00000638016 OR9G1Q8NH87 305 aa14.17□□□□□ -0.14
PNKP-230ENST00000638016 S100A13Q99584 98 aa14.17□□□□□ -0.14
PNKP-230ENST00000638016 MMP28Q9H239 520 aa14.17□□□□□ -0.14
PNKP-230ENST00000638016 DCLRE1BQ9H816 532 aa14.17□□□□□ -0.14
PNKP-230ENST00000638016 CKLFQ9UBR5 152 aa14.17□□□□□ -0.14
PNKP-230ENST00000638016 PSG11Q9UQ72 335 aa14.17□□□□□ -0.14
PNKP-230ENST00000638016 NOTCH3Q9UM47 2321 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 PTGES3LE9PB15 166 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 J3QR06 171 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 PLXNB1O43157 2135 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 FBXO24O75426 580 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 AMY1AP04745 511 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 AMY2AP04746 511 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 CDK1P06493 297 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 GP2P55259 537 aaKnown RBP14.16□□□□□ -0.14
PNKP-230ENST00000638016 PAX5Q02548 391 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 NSUN5P1Q3KNT7 163 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 ARSJQ5FYB0 599 aaPredicted RBP14.16□□□□□ -0.14
PNKP-230ENST00000638016 AWAT2Q6E213 333 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 C11orf88Q6PI97 169 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 TMEM104Q8NE00 496 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 RBMXL1Q96E39 390 aaKnown RBP14.16□□□□□ -0.14
PNKP-230ENST00000638016 OCSTAMPQ9BR26 566 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 SLC25A33Q9BSK2 321 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 WNT10AQ9GZT5 417 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 NCOR1P1Q9H4R4 102 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 IFT22Q9H7X7 185 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 LINC00574Q9H8X3 128 aa14.16□□□□□ -0.14
PNKP-230ENST00000638016 IGHV3-43A0A0B4J1X8 118 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 C15orf65H3BRN8 121 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 IGHV3-43DP0DP04 118 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 GTF2F2P13984 249 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 VDAC2P45880 294 aaPredicted RBP14.15□□□□□ -0.14
PNKP-230ENST00000638016 KCNJ3P48549 501 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 PRRX1P54821 245 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 MPV17LQ2QL34 196 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 ABCA11PQ4W5N1 156 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 C6orf141Q5SZD1 244 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 OR56B4Q8NH76 319 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 NEK7Q8TDX7 302 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 TOMM40LQ969M1 308 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 CITED2Q99967 270 aaPredicted RBP14.15□□□□□ -0.14
PNKP-230ENST00000638016 VCXQ9H320 206 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 ERGIC3Q9Y282 383 aa14.15□□□□□ -0.14
PNKP-230ENST00000638016 LSM2Q9Y333 95 aaKnown RBP14.15□□□□□ -0.14
PNKP-230ENST00000638016 A0A1W2PPI3 338 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms