RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	RBP4	P02753	201 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	ZNF273	Q14593	569 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	CR1L	Q2VPA4	569 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	MOGAT2	Q3SYC2	334 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	TCF23	Q7RTU1	214 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	TEX29	Q8N6K0	151 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	PHF21A	Q96BD5	680 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	FAAP24	Q9BTP7	215 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	SIRPD	Q9H106	197 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	GSX1	Q9H4S2	264 aa	Predicted RBP	18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	TAS2R3	Q9NYW6	316 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	COMMD3	Q9UBI1	195 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	AUP1	Q9Y679	476 aa		18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	SON	P18583	2426 aa	Known RBP	18.42	■□□□□ 0.54
CHRNA7-231	ENST00000637786	hCG_1809904	A0A1W2PP81	198 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786		A0A1W2PPE2	198 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786		A0A1W2PR64	198 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786		A0A1W2PRV1	198 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	POM121C	A8CG34	1229 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	APOA1	P02647	267 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	MT-ND4	P03905	459 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	ZNF728	P0DKX0	622 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	HIST1H1D	P16402	221 aa	Known RBP	18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	METTL11B	Q5VVY1	283 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	ZNF565	Q8N9K5	539 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	S100A16	Q96FQ6	103 aa	Known RBP	18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	ZNF714	Q96N38	554 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	WDFY2	Q96P53	400 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	SLIRP	Q9GZT3	109 aa	Known RBP	18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	RIMS4	Q9H426	269 aa	Predicted RBP	18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	DIABLO	Q9NR28	239 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	ONECUT1	Q9UBC0	465 aa		18.41	■□□□□ 0.54
CHRNA7-231	ENST00000637786	SERPINE3	A8MV23	424 aa		18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	MFNG	O00587	321 aa		18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	MMP9	P14780	707 aa		18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	DLX6	P56179	175 aa		18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	ARF6	P62330	175 aa		18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	UPRT	Q96BW1	309 aa		18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	GAL3ST2	Q9H3Q3	398 aa		18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	UNKL	Q9H9P5	680 aa	Known RBP	18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	ING3	Q9NXR8	418 aa		18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	OPN4	Q9UHM6	478 aa		18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	KCNK7	Q9Y2U2	307 aa		18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	NSD1	Q96L73	2696 aa	Predicted RBP	18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786	MTOR	P42345	2549 aa		18.4	■□□□□ 0.54
CHRNA7-231	ENST00000637786		A0A075B6Q4	140 aa		18.39	■□□□□ 0.53
CHRNA7-231	ENST00000637786	ZNF729	A6NN14	1252 aa	Predicted RBP	18.39	■□□□□ 0.53
CHRNA7-231	ENST00000637786	C17orf98	A8MV24	154 aa		18.39	■□□□□ 0.53
CHRNA7-231	ENST00000637786	TOX4	O94842	621 aa		18.39	■□□□□ 0.53
CHRNA7-231	ENST00000637786	NAPSA	O96009	420 aa		18.39	■□□□□ 0.53
CHRNA7-231	ENST00000637786	FOXB2	Q5VYV0	432 aa		18.39	■□□□□ 0.53
CHRNA7-231	ENST00000637786	TRAPPC6B	Q86SZ2	158 aa		18.39	■□□□□ 0.53
CHRNA7-231	ENST00000637786	DYRK2	Q92630	601 aa		18.39	■□□□□ 0.53
CHRNA7-231	ENST00000637786	METTL8	Q9H825	291 aa	Known RBP	18.39	■□□□□ 0.53
CHRNA7-231	ENST00000637786	BATF3	Q9NR55	127 aa		18.39	■□□□□ 0.53
CHRNA7-231	ENST00000637786	AK3	Q9UIJ7	227 aa		18.39	■□□□□ 0.53
CHRNA7-231	ENST00000637786		A6NHS1	94 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	GSTP1	P09211	210 aa	Known RBP	18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	CGB3	P0DN86	165 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	CGB7	P0DN87	165 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	CCL3L1	P16619	93 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	GZMH	P20718	246 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	GLP1R	P43220	463 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	ZNF554	Q86TJ5	538 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	RTN4RL2	Q86UN3	420 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	C11orf42	Q8N5U0	333 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786		Q8N7P7	452 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	OR13A1	Q8NGR1	328 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	MRPL30	Q8TCC3	161 aa	Known RBP	18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	LINC00574	Q9H8X3	128 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	C12orf4	Q9NQ89	552 aa		18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	MBNL3	Q9NUK0	354 aa	Known RBP	18.38	■□□□□ 0.53
CHRNA7-231	ENST00000637786	TRBV6-6	A0A0A6YYG2	114 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	XRCC3	O43542	346 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	ORC5	O43913	435 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	AVP	P01185	164 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	GNB3	P16520	340 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	PRTN3	P24158	256 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	CDK2	P24941	298 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	CDNF	Q49AH0	187 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	FAM120AOS	Q5T036	256 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	C6orf183	Q5T699	404 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	TRAT1	Q6PIZ9	186 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	C1orf229	Q6ZS94	237 aa	Predicted RBP	18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	CYYR1	Q96J86	154 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	TBX15	Q96SF7	602 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	DCUN1D5	Q9BTE7	237 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	NXF2	Q9GZY0	626 aa	Known RBP	18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	TRAPPC2L	Q9UL33	140 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	A3GALT2	U3KPV4	340 aa		18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	TEP1	Q99973	2627 aa	Known RBP	18.37	■□□□□ 0.53
CHRNA7-231	ENST00000637786	KBTBD11-OT1	A0A1B0GTJ5	212 aa		18.36	■□□□□ 0.53
CHRNA7-231	ENST00000637786	HPGDS	O60760	199 aa		18.36	■□□□□ 0.53
CHRNA7-231	ENST00000637786	EIF4E	P06730	217 aa	Known RBP	18.36	■□□□□ 0.53
CHRNA7-231	ENST00000637786	HNF1A	P20823	631 aa		18.36	■□□□□ 0.53
CHRNA7-231	ENST00000637786	PNLIPRP3	Q17RR3	467 aa		18.36	■□□□□ 0.53
CHRNA7-231	ENST00000637786	ZNF260	Q3ZCT1	412 aa		18.36	■□□□□ 0.53
CHRNA7-231	ENST00000637786	HEPN1	Q6WQI6	88 aa		18.36	■□□□□ 0.53
CHRNA7-231	ENST00000637786	MOB1B	Q7L9L4	216 aa		18.36	■□□□□ 0.53

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