RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 WDR74Q6RFH5 385 aaPredicted RBP13.86□□□□□ -0.19
CLN5-218ENST00000637397 ETV3LQ6ZN32 361 aa13.86□□□□□ -0.19
CLN5-218ENST00000637397 ABHD3Q8WU67 409 aa13.86□□□□□ -0.19
CLN5-218ENST00000637397 SF3B5Q9BWJ5 86 aaKnown RBP13.86□□□□□ -0.19
CLN5-218ENST00000637397 OR2H1Q9GZK4 316 aa13.86□□□□□ -0.19
CLN5-218ENST00000637397 J3QRE1 110 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 EPHA8P29322 1005 aaPredicted RBP13.85□□□□□ -0.19
CLN5-218ENST00000637397 FHITP49789 147 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 FAM209BQ5JX69 171 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 POM121Q96HA1 1249 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 Q9N2K0 584 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 SIP14410 1827 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 LOC101059948A0A1B0GTJ6 334 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 NKX6-3A6NJ46 265 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 LINC01387J3KSC0 135 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 HSBP1O75506 76 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 EIF3GO75821 320 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLN5-218ENST00000637397 IGHV3-13P01766 116 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 IGHV3-7P01780 117 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 PGA4P0DJD7 388 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 HLA-GP17693 338 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 SUB1P53999 127 aaKnown RBP eCLIP13.85□□□□□ -0.19
CLN5-218ENST00000637397 FOXO1Q12778 655 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 OR1K1Q8NGR3 316 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 TMEM147Q9BVK8 224 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 NAT8BQ9UHF3 227 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 DUXBA0A1W2PPF3 345 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 OR5B21A6NL26 309 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 MRGPRDQ8TDS7 321 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 MEGF10Q96KG7 1140 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 TP53BP1Q12888 1972 aaPredicted RBP13.85□□□□□ -0.19
CLN5-218ENST00000637397 A0A0U1RQV5 110 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 KLK2P20151 261 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.85□□□□□ -0.19
CLN5-218ENST00000637397 SCARF2Q96GP6 870 aaPredicted RBP13.85□□□□□ -0.19
CLN5-218ENST00000637397 TMEM38BQ9NVV0 291 aa13.85□□□□□ -0.19
CLN5-218ENST00000637397 TRAV14DV4A0A0A6YYC5 116 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 TMEM14DPA8MWL7 114 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 CLN5O75503 358 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 PTBP3O95758 552 aaKnown RBP13.84□□□□□ -0.19
CLN5-218ENST00000637397 CEP250Q9BV73 2442 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 OR5H1A6NKK0 313 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 KIAA1324LA8MWY0 1029 aaPredicted RBP13.84□□□□□ -0.19
CLN5-218ENST00000637397 NPIPB9F8W1W9 429 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 PPP1CCP36873 323 aaKnown RBP13.84□□□□□ -0.19
CLN5-218ENST00000637397 RTL8BQ17RB0 113 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 RNF151Q2KHN1 245 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 ZNF501Q96CX3 271 aaPredicted RBP13.84□□□□□ -0.19
CLN5-218ENST00000637397 TAAR9Q96RI9 348 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 HEXA-AS1Q9H8Q6 139 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 MSL2Q9HCI7 577 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 TMEM9BQ9NQ34 198 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 DECR2Q9NUI1 292 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 RNF222A6NCQ9 220 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 TOX3O15405 576 aaPredicted RBP13.84□□□□□ -0.19
CLN5-218ENST00000637397 ACTL6AO96019 429 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 UNC119Q13432 240 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 KHDC3LQ587J8 217 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 FUT9Q9Y231 359 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 FCN1O00602 326 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 CCL4P13236 92 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 SPINK14Q6IE38 97 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 MRGPRGQ86SM5 289 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 GPHA2Q96T91 129 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 CACFD1Q9UGQ2 172 aa13.84□□□□□ -0.19
CLN5-218ENST00000637397 LRRC30A6NM36 301 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 PRR32B1ATL7 298 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 TRGC2P03986 189 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 PSG2P11465 335 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 ERHP84090 104 aaKnown RBP13.83□□□□□ -0.2
CLN5-218ENST00000637397 BTNL3Q6UXE8 466 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 ACY3Q96HD9 319 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 OR2W1Q9Y3N9 320 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 MPC1Q9Y5U8 109 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 DHRS7CA6NNS2 312 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 TGFBR3LH3BV60 316 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 TGIF1Q15583 401 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 AARDQ4LEZ3 155 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 CXorf66Q5JRM2 361 aaPredicted RBP13.83□□□□□ -0.2
CLN5-218ENST00000637397 ARTNQ5T4W7 220 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 LRFN3Q9BTN0 628 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 FZR1Q9UM11 496 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 A0A0J9YW62 118 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 H0YL77 283 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 RPL36A-HNRNPH2H7BZ11 118 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 DEFA4P12838 97 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 RBM11P57052 281 aaKnown RBP13.83□□□□□ -0.2
CLN5-218ENST00000637397 FAM27BQ5VT28 67 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 AURKAIP1Q9NWT8 199 aaPredicted RBP13.83□□□□□ -0.2
CLN5-218ENST00000637397 CRYM-AS1A6NIL9 109 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 C11orf94C9JXX5 98 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 MDH2P40926 338 aaKnown RBP13.83□□□□□ -0.2
CLN5-218ENST00000637397 OR2Y1Q8NGV0 311 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 SMDT1Q9H4I9 107 aa13.83□□□□□ -0.2
CLN5-218ENST00000637397 RLFQ13129 1914 aa13.82□□□□□ -0.2
CLN5-218ENST00000637397 DNASE2O00115 360 aaPredicted RBP13.82□□□□□ -0.2
CLN5-218ENST00000637397 CHEK1O14757 476 aa13.82□□□□□ -0.2
CLN5-218ENST00000637397 MMP9P14780 707 aa13.82□□□□□ -0.2
CLN5-218ENST00000637397 IGLV3-21P80748 117 aaPredicted RBP13.82□□□□□ -0.2
CLN5-218ENST00000637397 ATP6V1FQ16864 119 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms