RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 DUX4L5P0CJ88 424 aa17.58■□□□□ 0.41
CLN8-213ENST00000637156 DUX4L6P0CJ89 424 aa17.58■□□□□ 0.41
CLN8-213ENST00000637156 DUX4L7P0CJ90 424 aa17.58■□□□□ 0.41
CLN8-213ENST00000637156 CDK10Q15131 360 aa17.58■□□□□ 0.41
CLN8-213ENST00000637156 GRK1Q15835 563 aa17.58■□□□□ 0.41
CLN8-213ENST00000637156 ATPAF1Q5TC12 328 aaPredicted RBP17.58■□□□□ 0.41
CLN8-213ENST00000637156 SLC35E4Q6ICL7 350 aa17.58■□□□□ 0.41
CLN8-213ENST00000637156 DUX4L9Q6RFH8 374 aaPredicted RBP17.58■□□□□ 0.41
CLN8-213ENST00000637156 ZNF788Q6ZQV5 615 aa17.58■□□□□ 0.41
CLN8-213ENST00000637156 CLEC4MQ9H2X3 399 aaPredicted RBP17.58■□□□□ 0.41
CLN8-213ENST00000637156 EHFQ9NZC4 300 aa17.58■□□□□ 0.41
CLN8-213ENST00000637156 DUX4Q9UBX2 424 aa17.58■□□□□ 0.41
CLN8-213ENST00000637156 A0A0B4J293 547 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 H7C1Q1 480 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 J3QKU1 62 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 SELLP14151 372 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 KCNJ3P48549 501 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 ARPC4P59998 168 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 TSPAN5P62079 268 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 RBMS2Q15434 407 aaKnown RBP17.58■□□□□ 0.4
CLN8-213ENST00000637156 ZNF561Q8N587 486 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 TPRX1Q8N7U7 411 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 GAFA1Q96PS6 74 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 PRRT1Q99946 306 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 GINS4Q9BRT9 223 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 C20orf85Q9H1P6 137 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 LIME1Q9H400 295 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 DSCAMO60469 2012 aa17.58■□□□□ 0.4
CLN8-213ENST00000637156 POM121CA8CG34 1229 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 TRDCB7Z8K6 153 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 TK1P04183 234 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 H2AFB2P0C5Z0 115 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 OR5H8P0DN80 308 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 CDKN1AP38936 164 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 GLIPR1P48060 266 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 TLE4Q04727 773 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 IGSF11Q5DX21 431 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 ARRDC1Q8N5I2 433 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 TERB2Q8NHR7 220 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 NEU4Q8WWR8 484 aaPredicted RBP17.57■□□□□ 0.4
CLN8-213ENST00000637156 MBNL3Q9NUK0 354 aaKnown RBP17.57■□□□□ 0.4
CLN8-213ENST00000637156 TRAPPC2LQ9UL33 140 aa17.57■□□□□ 0.4
CLN8-213ENST00000637156 RP2O75695 350 aa17.56■□□□□ 0.4
CLN8-213ENST00000637156 PAX5Q02548 391 aa17.56■□□□□ 0.4
CLN8-213ENST00000637156 KRBOX4Q5JUW0 171 aa17.56■□□□□ 0.4
CLN8-213ENST00000637156 ZNF660Q6AZW8 331 aaPredicted RBP17.56■□□□□ 0.4
CLN8-213ENST00000637156 DHRS11Q6UWP2 260 aa17.56■□□□□ 0.4
CLN8-213ENST00000637156 ZBTB8BQ8NAP8 495 aaPredicted RBP17.56■□□□□ 0.4
CLN8-213ENST00000637156 SLC25A21Q9BQT8 299 aaPredicted RBP17.56■□□□□ 0.4
CLN8-213ENST00000637156 ZNF665Q9H7R5 613 aa17.56■□□□□ 0.4
CLN8-213ENST00000637156 NECAP2Q9NVZ3 263 aa17.56■□□□□ 0.4
CLN8-213ENST00000637156 KIF25Q9UIL4 384 aa17.56■□□□□ 0.4
CLN8-213ENST00000637156 HERPUD1Q15011 391 aa17.56■□□□□ 0.4
CLN8-213ENST00000637156 ZMYND11Q15326 602 aa17.56■□□□□ 0.4
CLN8-213ENST00000637156 TATDN3Q17R31 274 aa17.56■□□□□ 0.4
CLN8-213ENST00000637156 IGKV1-6A0A0C4DH72 117 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 TMEM30CPA0ZSE6 113 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 MGST3O14880 152 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 ARPC1BO15143 372 aaKnown RBP17.55■□□□□ 0.4
CLN8-213ENST00000637156 FABP7O15540 132 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 RAG2P55895 527 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 BTG1P62324 171 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 AADACL3Q5VUY0 350 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 LHFPL1Q86WI0 220 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 FAM216BQ8N7L0 139 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 PPP1R35Q8TAP8 253 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 TMPRSS13Q9BYE2 586 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 DLL4Q9NR61 685 aa17.55■□□□□ 0.4
CLN8-213ENST00000637156 RAI1Q7Z5J4 1906 aaPredicted RBP17.55■□□□□ 0.4
CLN8-213ENST00000637156 MEIKINA0A087WXM9 373 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 KIR2DS1A0A191URI9 304 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 SIGLEC5O15389 551 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 TMPRSS2O15393 492 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 NDUFS7O75251 213 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 KIR2DS4P43632 304 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 SEC61A1P61619 476 aaKnown RBP17.54■□□□□ 0.4
CLN8-213ENST00000637156 KIR2DS1Q14954 304 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 CARTPTQ16568 116 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 OR6F1Q8NGZ6 308 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 BEX2Q9BXY8 128 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 BEX1Q9HBH7 125 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 USF3Q68DE3 2245 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 AKAP6Q13023 2319 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 USP9YO00507 2555 aaPredicted RBP17.54■□□□□ 0.4
CLN8-213ENST00000637156 OR5H14A6NHG9 310 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 OVOL3O00110 214 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 DAOP14920 347 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 MRPS11P82912 194 aaKnown RBP17.54■□□□□ 0.4
CLN8-213ENST00000637156 EDDM3AQ14507 147 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 LYPD2Q6UXB3 125 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 AKAP14Q86UN6 197 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 OR5D13Q8NGL4 314 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 IGFBPL1Q8WX77 278 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 TMEM246Q9BRR3 403 aa17.54■□□□□ 0.4
CLN8-213ENST00000637156 ZNF2Q9BSG1 426 aaPredicted RBP17.54■□□□□ 0.4
CLN8-213ENST00000637156 FCN3O75636 299 aa17.53■□□□□ 0.4
CLN8-213ENST00000637156 EIF2B2P49770 351 aaKnown RBP17.53■□□□□ 0.4
CLN8-213ENST00000637156 MECP2P51608 486 aaKnown RBP17.53■□□□□ 0.4
CLN8-213ENST00000637156 IL13RA1P78552 427 aa17.53■□□□□ 0.4
CLN8-213ENST00000637156 TMEM17Q86X19 198 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms