RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 KCNG3Q8TAE7 436 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 RAB1CQ92928 201 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 TIMD4Q96H15 378 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 GAL3ST1Q99999 423 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 DPCDQ9BVM2 203 aaPredicted RBP12.11□□□□□ -0.47
LINC00339-208ENST00000634934 PPIAL4AQ9Y536 164 aa12.11□□□□□ -0.47
LINC00339-208ENST00000634934 TMEM272A0A1B0GTI8 110 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 OOEPA6NGQ2 149 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.1□□□□□ -0.47
LINC00339-208ENST00000634934 LGALS8O00214 317 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 TSC22D2O75157 780 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 RPA2P15927 270 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 MGMTP16455 207 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 HLA-GP17693 338 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 DUSP1P28562 367 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 S100A11P31949 105 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 GPR6P46095 362 aaPredicted RBP12.1□□□□□ -0.47
LINC00339-208ENST00000634934 FGF12P61328 243 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 MICBQ29980 383 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 ELP2Q6IA86 826 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 TMEM65Q6PI78 240 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 FIP1L1Q6UN15 594 aaKnown RBP12.1□□□□□ -0.47
LINC00339-208ENST00000634934 LRRC75A-AS1Q8N1F1 130 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 OR2AK2Q8NG84 335 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 OR5T2Q8NGG2 359 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 FAM168AQ92567 244 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 DACT3Q96B18 629 aaPredicted RBP12.1□□□□□ -0.47
LINC00339-208ENST00000634934 SELENOIQ9C0D9 397 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 RHOFQ9HBH0 211 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 HES4Q9HCC6 221 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 IL36RNQ9UBH0 155 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 OR14J1Q9UGF5 321 aa12.1□□□□□ -0.47
LINC00339-208ENST00000634934 CREBBPQ92793 2442 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 TRAV38-1A0A0B4J264 116 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 TMEM14DPA8MWL7 114 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 L7N2F9 121 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 TBPP20226 339 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 QRFPP83859 136 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 PLA2G7Q13093 441 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 UNC119Q13432 240 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 AANATQ16613 207 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 PIGYQ3MUY2 71 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 OR2W3Q7Z3T1 314 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 COMMD7Q86VX2 200 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 SCARB1Q8WTV0 552 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 SEC22CQ9BRL7 303 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 TMEM59Q9BXS4 323 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 ZNF69Q9UC07 566 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 ST3GAL6Q9Y274 331 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 WIPI2Q9Y4P8 454 aa12.09□□□□□ -0.47
LINC00339-208ENST00000634934 OR2AT4A6NND4 320 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 GYPAP02724 150 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 VSIG10L2P0DP72 767 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 MUC1P15941 1255 aaPredicted RBP12.08□□□□□ -0.48
LINC00339-208ENST00000634934 CXCL2P19875 107 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 MDH2P40926 338 aaKnown RBP12.08□□□□□ -0.48
LINC00339-208ENST00000634934 EFNB2P52799 333 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 MEF2DQ14814 521 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 PDCD1Q15116 288 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 CLEC12BQ2HXU8 276 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 TEX36Q5VZQ5 186 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 STEAP1BQ6NZ63 245 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 FAHD2BQ6P2I3 314 aaPredicted RBP12.08□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A1Q86YD7 464 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 Q8NFD4 153 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 OR51T1Q8NGJ9 327 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 FAHD2AQ96GK7 314 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 GINS4Q9BRT9 223 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 PIMREGQ9BSJ6 248 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 GLS2Q9UI32 602 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 RAB22AQ9UL26 194 aa12.08□□□□□ -0.48
LINC00339-208ENST00000634934 TANC2Q9HCD6 1990 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 RFPL4AA6NLU0 287 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 RFPL4AL1F8VTS6 287 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 KNG1P01042 644 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 IGHV2-70P01814 119 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 TFF1P04155 84 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 PSG2P11465 335 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 ANXA7P20073 488 aaKnown RBP12.07□□□□□ -0.48
LINC00339-208ENST00000634934 ZP3P21754 424 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 GABRR1P24046 479 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 GABRA2P47869 451 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 CEBPDP49716 269 aaPredicted RBP12.07□□□□□ -0.48
LINC00339-208ENST00000634934 RBM11P57052 281 aaKnown RBP12.07□□□□□ -0.48
LINC00339-208ENST00000634934 DSCR9P59020 149 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 FGL1Q08830 312 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 TAF9Q16594 264 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 Q5PR19 223 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 LRRC20Q8TCA0 184 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 C10orf105Q8TEF2 133 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 MRPS24Q96EL2 167 aaKnown RBP12.07□□□□□ -0.48
LINC00339-208ENST00000634934 URM1Q9BTM9 101 aaKnown RBP12.07□□□□□ -0.48
LINC00339-208ENST00000634934 BPESC1Q9GZL8 116 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 NARFLQ9H6Q4 476 aa12.07□□□□□ -0.48
LINC00339-208ENST00000634934 MFSD2BA6NFX1 497 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 KRBOX1C9JBD0 128 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 NDUFS8O00217 210 aa12.06□□□□□ -0.48
LINC00339-208ENST00000634934 GEMIN2O14893 280 aaKnown RBP12.06□□□□□ -0.48
LINC00339-208ENST00000634934 CFDP00746 253 aaPredicted RBP12.06□□□□□ -0.48
LINC00339-208ENST00000634934 PRDX2P32119 198 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms