RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 CTSSP25774 331 aa12.37□□□□□ -0.43
UBE3A-220ENST00000630424 SLC6A1P30531 599 aa12.37□□□□□ -0.43
UBE3A-220ENST00000630424 PRDX2P32119 198 aa12.37□□□□□ -0.43
UBE3A-220ENST00000630424 ERVFRD-1P60508 538 aa12.37□□□□□ -0.43
UBE3A-220ENST00000630424 KRTDAPP60985 99 aa12.37□□□□□ -0.43
UBE3A-220ENST00000630424 SSX1Q16384 188 aa12.37□□□□□ -0.43
UBE3A-220ENST00000630424 RBPMS2Q6ZRY4 209 aaKnown RBP12.37□□□□□ -0.43
UBE3A-220ENST00000630424 GAPTQ8N292 157 aa12.37□□□□□ -0.43
UBE3A-220ENST00000630424 ZNF680Q8NEM1 530 aa12.37□□□□□ -0.43
UBE3A-220ENST00000630424 C9orf170A2RU37 121 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 GATCO43716 136 aaKnown RBP12.36□□□□□ -0.43
UBE3A-220ENST00000630424 PF4V1P10720 104 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 UCP2P55851 309 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 MS4A3Q96HJ5 214 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 RHOFQ9HBH0 211 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 IGHV3-21A0A0B4J1V1 117 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 A0A1W2PQM1 296 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 CDCP2Q5VXM1 449 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 DTD1Q8TEA8 209 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 SSMEM1Q8WWF3 244 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 OR2V2Q96R30 315 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 P2RX4Q99571 388 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 ASCL3Q9NQ33 180 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 FFAR1O14842 300 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 CA11O75493 328 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 ADAP1O75689 374 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 HTR1DP28221 377 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 LOXL3P58215 753 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 TIAL1Q01085 375 aaKnown RBP eCLIP12.36□□□□□ -0.43
UBE3A-220ENST00000630424 DMKNQ6E0U4 476 aaPredicted RBP12.36□□□□□ -0.43
UBE3A-220ENST00000630424 SLC23A3Q6PIS1 610 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 DIRC2Q96SL1 478 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 ATP5SQ99766 215 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 NAT8BQ9UHF3 227 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 PPYP01298 95 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 GUCA2BQ16661 112 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 SLC26A10Q8NG04 563 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 PRSS3P2Q8NHM4 247 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 LPAR3Q9UBY5 353 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 PRNDQ9UKY0 176 aa12.36□□□□□ -0.43
UBE3A-220ENST00000630424 STRCQ7RTU9 1775 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 CSF2RBP32927 897 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 ZNF429Q86V71 674 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 FAM222BQ8WU58 562 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 NUDT16L1Q9BRJ7 211 aaKnown RBP12.35□□□□□ -0.43
UBE3A-220ENST00000630424 OR4C45A6NMZ5 311 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 SYNGR1O43759 233 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 NEURL1O76050 574 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 ARG1P05089 322 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 PPP1CCP36873 323 aaKnown RBP12.35□□□□□ -0.43
UBE3A-220ENST00000630424 CAMPP49913 170 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 GUK1Q16774 197 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 ITLN1Q8WWA0 313 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 ANGPTL4Q9BY76 406 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 RNF122Q9H9V4 155 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 CACNA1HO95180 2353 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 LAMB1P07942 1786 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 GPR179Q6PRD1 2367 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 ATP6V1G2-DDX39BF2Z307 99 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 VDAC1P21796 283 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 FCARP24071 287 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 RPL13AP40429 203 aaKnown RBP12.35□□□□□ -0.43
UBE3A-220ENST00000630424 SPCS3P61009 180 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 CSRP2Q16527 193 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 FAM78BQ5VT40 261 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 OR1L8Q8NGR8 309 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 PARP11Q9NR21 331 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 RNF115Q9Y4L5 304 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 IGHV3-72A0A0B4J1Y9 119 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 PMCHP20382 165 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 TFPI2P48307 235 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 MMP16P51512 607 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 ATP6V1FQ16864 119 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 FAM27BQ5VT28 67 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 TMEM88Q6PEY1 159 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 SHISA5Q8N114 240 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 OR4A4PQ8NGN8 299 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 AKIP1Q9NQ31 210 aa12.35□□□□□ -0.43
UBE3A-220ENST00000630424 SDK2Q58EX2 2172 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 TRIP11Q15643 1979 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 CENPVL1A0A0U1RR11 272 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 TGOLN2O43493 480 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 CTSDP07339 412 aaPredicted RBP12.34□□□□□ -0.43
UBE3A-220ENST00000630424 CPN1P15169 458 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 OR1L1Q8NH94 360 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 WNT2BQ93097 391 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 CHST5Q9GZS9 411 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 ORM1P02763 201 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 RPS4Y1P22090 263 aaKnown RBP12.34□□□□□ -0.43
UBE3A-220ENST00000630424 PSG4Q00888 419 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 KLRB1Q12918 225 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 IL13RA2Q14627 380 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 RSPO4Q2I0M5 234 aaPredicted RBP12.34□□□□□ -0.43
UBE3A-220ENST00000630424 TEX29Q8N6K0 151 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 C5orf17Q8NAS9 161 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 AUP1Q9Y679 476 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 SCO1O75880 301 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 SLC35B1P78383 322 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 HLA-DRB3P79483 266 aa12.34□□□□□ -0.43
UBE3A-220ENST00000630424 COL10A1Q03692 680 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms