RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TRAPPC2P0DI81 140 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 TRAPPC2BP0DI82 140 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 VSIG10L2P0DP72 767 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 EGR1P18146 543 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 ANXA7P20073 488 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 SERPINF1P36955 418 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 CFHR2P36980 270 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 GATA4P43694 442 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 CEBPDP49716 269 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 ACP7Q6ZNF0 438 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 SLC36A1Q7Z2H8 476 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 C5orf24Q7Z6I8 188 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 CIARTQ8N365 385 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 HPS1Q92902 700 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 BEX2Q9BXY8 128 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 PPA2Q9H2U2 334 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 RIMS4Q9H426 269 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 BEX1Q9HBH7 125 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 ZNF286AQ9HBT8 521 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 ETAA1Q9NY74 926 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 EHFQ9NZC4 300 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 OR14J1Q9UGF5 321 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 KIAA2026Q5HYC2 2103 aa7.97□□□□□ -1.13
PDLIM5-223ENST00000627587 ARID1AO14497 2285 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 HMX3A6NHT5 357 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 KIAA1324LA8MWY0 1029 aaPredicted RBP7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 SRRM5B3KS81 715 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 SIRPB1O00241 398 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 SLC33A1O00400 549 aaPredicted RBP7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 HAND1O96004 215 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 KNG1P01042 644 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 TFF1P04155 84 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 APOBEC3AP31941 199 aaPredicted RBP7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 MDH2P40926 338 aaKnown RBP7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 CBX3Q13185 183 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 CDK10Q15131 360 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 MST1LQ2TV78 715 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 PAN3Q58A45 887 aaKnown RBP7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 METTL11BQ5VVY1 283 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 ZNF660Q6AZW8 331 aaPredicted RBP7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 OVCH2Q7RTZ1 564 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 MOGAT3Q86VF5 341 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 LHFPL1Q86WI0 220 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 ZCCHC24Q8N2G6 241 aaKnown RBP7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 OR6F1Q8NGZ6 308 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 ERGIC1Q969X5 290 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 PERPQ96FX8 193 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 MDFIQ99750 246 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 RASL12Q9NYN1 266 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 VSIG4Q9Y279 399 aa7.96□□□□□ -1.13
PDLIM5-223ENST00000627587 FBN3Q75N90 2809 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 TMEM82A0PJX8 343 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 C17orf100A8MU93 164 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 SDCBPO00560 298 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 CCNKO75909 580 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 LHBP01229 141 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 ADH4P08319 380 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 TNFRSF1AP19438 455 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 RRAS2P62070 204 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 GRK1Q15835 563 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 SRSF7Q16629 238 aaKnown RBP eCLIP7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 ATPAF1Q5TC12 328 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 AADACL3Q5VUY0 350 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 GLDNQ6ZMI3 551 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 GCSAMQ8N6F7 178 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 ZDHHC22Q8N966 263 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 TERB2Q8NHR7 220 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 ST6GAL2Q96JF0 529 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 OR51J1Q9H342 316 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 GPN1Q9HCN4 374 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 NECAP2Q9NVZ3 263 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 TREM2Q9NZC2 230 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 NPTNQ9Y639 398 aa7.96□□□□□ -1.14
PDLIM5-223ENST00000627587 FN1P02751 2386 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 HIVEP2P31629 2446 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 CEACAM18A8MTB9 384 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 B9A039 149 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 INAFM1C9JVW0 142 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 IFNL4K9M1U5 179 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 PSPNO60542 156 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 CRLF1O75462 422 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 IL5P05113 134 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 CD55P08174 381 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 LMO1P25800 156 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 EFNB3Q15768 340 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 FAM209AQ5JX71 171 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 C17orf107Q6ZR85 190 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 Q6ZS49 121 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 TMED4Q7Z7H5 227 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 FAM90A1Q86YD7 464 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 GAPTQ8N292 157 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 OR11L1Q8NGX0 322 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 PLPPR1Q8TBJ4 325 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 MRPL30Q8TCC3 161 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 CCDC107Q8WV48 283 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 CAPSLQ8WWF8 208 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 IGFBPL1Q8WX77 278 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 MED30Q96HR3 178 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 SEC22CQ9BRL7 303 aa7.95□□□□□ -1.14
PDLIM5-223ENST00000627587 TMEM204Q9BSN7 226 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms