RNA–Protein interactions for RNA: ENST00000623985.3

LINC00643-206, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 864 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-206ENST00000623985 Q8N2B8 174 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 NKAIN3Q8N8D7 197 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 SUMF2Q8NBJ7 301 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 OR13A1Q8NGR1 328 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 PLPPR1Q8TBJ4 325 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 KIRREL1Q96J84 757 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 DPCDQ9BVM2 203 aaPredicted RBP11.92□□□□□ -0.5
LINC00643-206ENST00000623985 LINC00574Q9H8X3 128 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 ZNF702PQ9H963 129 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 SIGLEC9Q9Y336 463 aa11.92□□□□□ -0.5
LINC00643-206ENST00000623985 LEUTXA8MZ59 168 aa11.91□□□□□ -0.5
LINC00643-206ENST00000623985 TOR1AO14656 332 aa11.91□□□□□ -0.5
LINC00643-206ENST00000623985 GEMIN2O14893 280 aaKnown RBP11.91□□□□□ -0.5
LINC00643-206ENST00000623985 GTF2F2P13984 249 aa11.91□□□□□ -0.5
LINC00643-206ENST00000623985 JUNBP17275 347 aaPredicted RBP11.91□□□□□ -0.5
LINC00643-206ENST00000623985 PRRX1P54821 245 aa11.91□□□□□ -0.5
LINC00643-206ENST00000623985 SLC22A6Q4U2R8 563 aa11.91□□□□□ -0.5
LINC00643-206ENST00000623985 Q6ZTK2 550 aa11.91□□□□□ -0.5
LINC00643-206ENST00000623985 C16orf82Q7Z2V1 217 aa11.91□□□□□ -0.5
LINC00643-206ENST00000623985 CDH26Q8IXH8 852 aa11.91□□□□□ -0.5
LINC00643-206ENST00000623985 JAGN1Q8N5M9 183 aa11.91□□□□□ -0.5
LINC00643-206ENST00000623985 KLHDC1Q8N7A1 406 aa11.91□□□□□ -0.5
LINC00643-206ENST00000623985 MYDGFQ969H8 173 aa11.91□□□□□ -0.5
LINC00643-206ENST00000623985 MRPS28Q9Y2Q9 187 aaKnown RBP11.91□□□□□ -0.5
LINC00643-206ENST00000623985 AMMECR1Q9Y4X0 333 aaPredicted RBP11.91□□□□□ -0.5
LINC00643-206ENST00000623985 A0A1W2PP11 408 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 FAM90A22PA8MWA6 464 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 OOSP1A8MZH6 123 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 BUB1B-PAK6H3BSN5 160 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 H3BUI4 141 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 NFYBP25208 207 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 BRS3P32247 399 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 C6orf141Q5SZD1 244 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 AWAT2Q6E213 333 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 OR10A7Q8NGE5 316 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 OR9G1Q8NH87 305 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 MRGPRDQ8TDS7 321 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 NRG4Q8WWG1 115 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 MUL1Q969V5 352 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 MRPS24Q96EL2 167 aaKnown RBP11.9□□□□□ -0.5
LINC00643-206ENST00000623985 PRSS22Q9GZN4 317 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 MMP28Q9H239 520 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 SCN3BQ9NY72 215 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 IDI2-AS1Q9NZ38 188 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 ZNF581Q9P0T4 197 aa11.9□□□□□ -0.5
LINC00643-206ENST00000623985 A0A1W2PPK0 400 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 TMEM30CPA0ZSE6 113 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 NPIPB11E5RHQ5 1161 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 TSPAN15O95858 294 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 MAS1P04201 325 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 SSTR5P35346 364 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 TPTE2P1Q5T6R2 138 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 CCDC144NLQ6NUI1 221 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 GLIPR1L1Q6UWM5 242 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 CFHR4Q92496 578 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 AKR1E2Q96JD6 320 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 UQCC2Q9BRT2 126 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 VCX3BQ9H321 246 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 LIN7BQ9HAP6 207 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 SPACA1Q9HBV2 294 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 SERTAD4Q9NUC0 356 aa11.89□□□□□ -0.51
LINC00643-206ENST00000623985 LSM2Q9Y333 95 aaKnown RBP11.89□□□□□ -0.51
LINC00643-206ENST00000623985 PTGES3LE9PB15 166 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 LY6LH3BQJ8 138 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 PIN1P1O15428 100 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 VSIG10L2P0DP72 767 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 MYF6P23409 242 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 MNDAP41218 407 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 SLC35A2P78381 396 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 RBM39Q14498 530 aaKnown RBP11.88□□□□□ -0.51
LINC00643-206ENST00000623985 HABP2Q14520 560 aaPredicted RBP11.88□□□□□ -0.51
LINC00643-206ENST00000623985 ATAD3CQ5T2N8 411 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 SLC16A12Q6ZSM3 486 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 LYPD6Q86Y78 171 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 MS4A15Q8N5U1 240 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 NEK7Q8TDX7 302 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 TOMM40LQ969M1 308 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 ANKRD60Q9BZ19 345 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 RCC2Q9P258 522 aaKnown RBP11.88□□□□□ -0.51
LINC00643-206ENST00000623985 NOTCH1P46531 2555 aa11.88□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A10PA6NDY2 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A18PA6NE21 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A16PA6NEW6 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A20PA6NIJ5 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A7PA6NKC0 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A12PA8MX19 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A5PA8MXJ8 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A23PA8MXZ1 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 J3QR06 171 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 CSF1P09603 554 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A15PP0C7V4 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A13PP0C7W8 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A14PP0C7W9 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 FAM90A24PP0C7X0 464 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 SPHARQ15513 63 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 ARSJQ5FYB0 599 aaPredicted RBP11.87□□□□□ -0.51
LINC00643-206ENST00000623985 UTF1Q5T230 341 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 ZNF497Q6ZNH5 498 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 RPEQ96AT9 228 aa11.87□□□□□ -0.51
LINC00643-206ENST00000623985 OR5M11Q96RB7 305 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms