RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 C14orf166Q9Y224 244 aaKnown RBP8.9□□□□□ -0.99
VPS11-208ENST00000621676 PRRC2AP48634 2157 aaKnown RBP8.89□□□□□ -0.99
VPS11-208ENST00000621676 CFDP00746 253 aaPredicted RBP8.89□□□□□ -0.99
VPS11-208ENST00000621676 IL2RGP31785 369 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 CDKN1AP38936 164 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 CEACAM6P40199 344 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 ARHGDIBP52566 201 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 IFITM2Q01629 132 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 TMEM108Q6UXF1 575 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 TMEM229BQ8NBD8 167 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 COQ8AQ8NI60 647 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 RTN4IP1Q8WWV3 396 aaPredicted RBP8.89□□□□□ -0.99
VPS11-208ENST00000621676 PRRT1Q99946 306 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 SLC5A7Q9GZV3 580 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 OR51I2Q9H344 312 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 GLRX2Q9NS18 164 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 ITPR2Q14571 2701 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 ANKRD17O75179 2603 aaKnown RBP8.89□□□□□ -0.99
VPS11-208ENST00000621676 HAND1O96004 215 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 ZNF728P0DKX0 622 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 GAPTQ8N292 157 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 ARL11Q969Q4 196 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 ZNF286AQ9HBT8 521 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 DECR2Q9NUI1 292 aa8.89□□□□□ -0.99
VPS11-208ENST00000621676 CISD1Q9NZ45 108 aaKnown RBP8.89□□□□□ -0.99
VPS11-208ENST00000621676 C9orf170A2RU37 121 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 CTDSPLO15194 276 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 ST8SIA5O15466 376 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 THBDP07204 575 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 APELAP0DMC3 54 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 RAB6AP20340 208 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 MRPS10P82664 201 aaKnown RBP8.88□□□□□ -0.99
VPS11-208ENST00000621676 ZNF816Q0VGE8 651 aaPredicted RBP8.88□□□□□ -0.99
VPS11-208ENST00000621676 KLRB1Q12918 225 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 DAZAP2Q15038 168 aaPredicted RBP8.88□□□□□ -0.99
VPS11-208ENST00000621676 AADACL3Q5VUY0 350 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 VKORC1L1Q8N0U8 176 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 OR10C1Q96KK4 312 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 GNG12Q9UBI6 72 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 UBE2J1Q9Y385 318 aaPredicted RBP8.88□□□□□ -0.99
VPS11-208ENST00000621676 RAC2P15153 192 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 PPP3CBP16298 524 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 TMEM42Q69YG0 159 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 WDR82Q6UXN9 313 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 TMEM217Q8N7C4 229 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 TMEM171Q8WVE6 324 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 MRPL24Q96A35 216 aaKnown RBP8.88□□□□□ -0.99
VPS11-208ENST00000621676 TANC2Q9HCD6 1990 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 L7N2F9 121 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 TK1P04183 234 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 GSTP1P09211 210 aaKnown RBP8.88□□□□□ -0.99
VPS11-208ENST00000621676 UBBP0CG47 229 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 PMELP40967 661 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 HTR2BP41595 481 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 FGF12P61328 243 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 CDK10Q15131 360 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 TIMM23BQ5SRD1 257 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 DNTTIP1Q9H147 329 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 COMMD9Q9P000 198 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 RFNGQ9Y644 331 aa8.88□□□□□ -0.99
VPS11-208ENST00000621676 A0A0B4J2A0 478 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 IGKV1-6A0A0C4DH72 117 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.87□□□□□ -0.99
VPS11-208ENST00000621676 SULT1C2O00338 296 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 ZNF780AO75290 641 aaPredicted RBP8.87□□□□□ -0.99
VPS11-208ENST00000621676 COX5AP20674 150 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 GZMKP49863 264 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 HERPUD1Q15011 391 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 LGALSLQ3ZCW2 172 aaPredicted RBP8.87□□□□□ -0.99
VPS11-208ENST00000621676 KRBOX4Q5JUW0 171 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 HIST2H2BCQ6DN03 193 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 IGF2-ASQ6U949 168 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 SPSB4Q96A44 273 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 HINT2Q9BX68 163 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 GP6Q9HCN6 339 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 SHPKQ9UHJ6 478 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 SERPINE3A8MV23 424 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 IAH1Q2TAA2 248 aaPredicted RBP8.87□□□□□ -0.99
VPS11-208ENST00000621676 OVCH2Q7RTZ1 564 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 ZNF546Q86UE3 836 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 SSC4DQ8WTU2 575 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 TMEM230Q96A57 120 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 CNTNAP3BQ96NU0 1288 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 RTBDNQ9BSG5 229 aaPredicted RBP8.87□□□□□ -0.99
VPS11-208ENST00000621676 CNTNAP3Q9BZ76 1288 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 MBD2Q9UBB5 411 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 MPC1Q9Y5U8 109 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 J3QT63 122 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 FBXO24O75426 580 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 KRASP01116 189 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 PTBP1P26599 531 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS11-208ENST00000621676 TIMP3P35625 211 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 AKR1C2P52895 323 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 AKR1C1Q04828 323 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 ZNF626Q68DY1 528 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 SLC36A1Q7Z2H8 476 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 OR2W3Q7Z3T1 314 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 HOGA1Q86XE5 327 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 OR13A1Q8NGR1 328 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 OR10J5Q8NHC4 309 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms