RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 MEIKINA0A087WXM9 373 aa11.21□□□□□ -0.62
NEK3-210ENST00000620675 MFNGO00587 321 aa11.21□□□□□ -0.62
NEK3-210ENST00000620675 FOSL1P15407 271 aa11.21□□□□□ -0.62
NEK3-210ENST00000620675 DLX6P56179 175 aa11.21□□□□□ -0.62
NEK3-210ENST00000620675 PAX8Q06710 450 aa11.21□□□□□ -0.62
NEK3-210ENST00000620675 CD276Q5ZPR3 534 aa11.21□□□□□ -0.62
NEK3-210ENST00000620675 FAM53AQ6NSI3 398 aaPredicted RBP11.21□□□□□ -0.62
NEK3-210ENST00000620675 ZNF497Q6ZNH5 498 aa11.21□□□□□ -0.62
NEK3-210ENST00000620675 LAX1Q8IWV1 398 aa11.21□□□□□ -0.62
NEK3-210ENST00000620675 PPP1R35Q8TAP8 253 aa11.21□□□□□ -0.62
NEK3-210ENST00000620675 GCDHQ92947 438 aaPredicted RBP11.21□□□□□ -0.62
NEK3-210ENST00000620675 RAB3CQ96E17 227 aa11.21□□□□□ -0.62
NEK3-210ENST00000620675 SPACA1Q9HBV2 294 aa11.21□□□□□ -0.62
NEK3-210ENST00000620675 GPR37O15354 613 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 ENSAO43768 121 aaKnown RBP11.2□□□□□ -0.62
NEK3-210ENST00000620675 ECDO95905 644 aaPredicted RBP11.2□□□□□ -0.62
NEK3-210ENST00000620675 MT-ND4P03905 459 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 MMP9P14780 707 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 RCC1P18754 421 aaPredicted RBP11.2□□□□□ -0.62
NEK3-210ENST00000620675 OMGP23515 440 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 ERP29P30040 261 aaKnown RBP11.2□□□□□ -0.62
NEK3-210ENST00000620675 GDNFP39905 211 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 SCAND1P57086 179 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 UBE2NLQ5JXB2 153 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 MRPL30Q8TCC3 161 aaKnown RBP11.2□□□□□ -0.62
NEK3-210ENST00000620675 MRGPRDQ8TDS7 321 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 ABCG5Q9H222 651 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 SIRT7Q9NRC8 400 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 TRBV23-1A0A0A0MS06 115 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 A0A0G2JMP0 313 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 A0A0X1KG70 313 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 METTL21EPA6NDL7 271 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 TMEM235A6NFC5 223 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 HIST1H1DP16402 221 aaKnown RBP11.2□□□□□ -0.62
NEK3-210ENST00000620675 SSTR5P35346 364 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 SOX6P35712 828 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 GLP1RP43220 463 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 CR1LQ2VPA4 569 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 CDNFQ49AH0 187 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 PDZD9Q8IXQ8 264 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 OR4M2Q8NGB6 313 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 TBX15Q96SF7 602 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 PCGF1Q9BSM1 259 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 SIRPDQ9H106 197 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 C7orf69Q9H7B7 122 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 HSF4Q9ULV5 492 aa11.2□□□□□ -0.62
NEK3-210ENST00000620675 TRAV18A0A075B6X5 111 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 LIPFP07098 398 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 CGB3P0DN86 165 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 CGB7P0DN87 165 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 C17orf58Q2M2W7 97 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 ZNF260Q3ZCT1 412 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 SLC35E4Q6ICL7 350 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 ZNF782Q6ZMW2 699 aaPredicted RBP11.19□□□□□ -0.62
NEK3-210ENST00000620675 TRAPPC6BQ86SZ2 158 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 GAPTQ8N292 157 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 RFESDQ8TAC1 157 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 ACOT12Q8WYK0 555 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 C6orf62Q9GZU0 229 aaPredicted RBP11.19□□□□□ -0.62
NEK3-210ENST00000620675 NDUFA13Q9P0J0 144 aa11.19□□□□□ -0.62
NEK3-210ENST00000620675 IGHV3OR16-10A0A075B7F0 116 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 TMEM30CPA0ZSE6 113 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 FAM172BPA6NC97 362 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 RGS5O15539 181 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 NAPSAO96009 420 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 PAX5Q02548 391 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 KLRD1Q13241 179 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 RBM39Q14498 530 aaKnown RBP11.18□□□□□ -0.62
NEK3-210ENST00000620675 BTNL3Q6UXE8 466 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 MCFD2Q8NI22 146 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 NUDCD2Q8WVJ2 157 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 MAFIPQ8WZ33 124 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 AP3S1Q92572 193 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 POM121Q96HA1 1249 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 NXF2Q9GZY0 626 aaKnown RBP11.18□□□□□ -0.62
NEK3-210ENST00000620675 ZNF230Q9UIE0 474 aaPredicted RBP11.18□□□□□ -0.62
NEK3-210ENST00000620675 KCNS2Q9ULS6 477 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 LINC00312Q9Y6C7 94 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 hADV38S2A0JD32 116 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 A8MV72 311 aaPredicted RBP11.18□□□□□ -0.62
NEK3-210ENST00000620675 INAFM1C9JVW0 142 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 TMEM127O75204 238 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 ZNF728P0DKX0 622 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 KCNJ3P48549 501 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 MEF2CQ06413 473 aaPredicted RBP11.18□□□□□ -0.62
NEK3-210ENST00000620675 PRAMEF5Q5TYX0 476 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 VMO1Q7Z5L0 202 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 WDFY2Q96P53 400 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 SOX21Q9Y651 276 aaPredicted RBP11.18□□□□□ -0.62
NEK3-210ENST00000620675 AUP1Q9Y679 476 aa11.18□□□□□ -0.62
NEK3-210ENST00000620675 SSX5O60225 188 aa11.17□□□□□ -0.62
NEK3-210ENST00000620675 APOA1P02647 267 aa11.17□□□□□ -0.62
NEK3-210ENST00000620675 GLAP06280 429 aa11.17□□□□□ -0.62
NEK3-210ENST00000620675 IGHV4-38-2P0DP08 117 aa11.17□□□□□ -0.62
NEK3-210ENST00000620675 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
NEK3-210ENST00000620675 KLF17Q5JT82 389 aaPredicted RBP11.17□□□□□ -0.62
NEK3-210ENST00000620675 FAM120AOSQ5T036 256 aa11.17□□□□□ -0.62
NEK3-210ENST00000620675 METTL11BQ5VVY1 283 aa11.17□□□□□ -0.62
NEK3-210ENST00000620675 ZNF714Q96N38 554 aa11.17□□□□□ -0.62
NEK3-210ENST00000620675 TRGV10A0A0A0MS01 117 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms