RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 SP6Q3SY56 376 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 ACOT7LQ6ZUV0 252 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 C22orf34Q6ZV56 151 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 KCNRGQ8N5I3 272 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 CCDC71LQ8N9Z2 235 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 OR11L1Q8NGX0 322 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 PLPPR1Q8TBJ4 325 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 RNF126Q9BV68 326 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 SUCNR1Q9BXA5 334 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 UFSP2Q9NUQ7 469 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 MBD2Q9UBB5 411 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 GLS2Q9UI32 602 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 SH3BGRL2Q9UJC5 107 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 WNT9BO14905 357 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 KCNJ3P48549 501 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 HLA-DRB3P79483 266 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 IL15RAQ13261 267 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 PCSK4Q6UW60 755 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 GAPTQ8N292 157 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 OR2Z1Q8NG97 314 aa16.09■□□□□ 0.17
PSPC1-206ENST00000619300 USB1Q9BQ65 265 aaKnown RBP16.09■□□□□ 0.17
PSPC1-206ENST00000619300 TRBV6-7A0A0A0MS04 114 aa16.08■□□□□ 0.16
PSPC1-206ENST00000619300 LMO1P25800 156 aa16.08■□□□□ 0.16
PSPC1-206ENST00000619300 ACP7Q6ZNF0 438 aa16.08■□□□□ 0.16
PSPC1-206ENST00000619300 MOB1BQ7L9L4 216 aa16.08■□□□□ 0.16
PSPC1-206ENST00000619300 FAM185AQ8N0U4 392 aa16.08■□□□□ 0.16
PSPC1-206ENST00000619300 INO80EQ8NBZ0 244 aaPredicted RBP16.08■□□□□ 0.16
PSPC1-206ENST00000619300 OR14J1Q9UGF5 321 aa16.08■□□□□ 0.16
PSPC1-206ENST00000619300 PTPRQQ9UMZ3 2332 aa16.08■□□□□ 0.16
PSPC1-206ENST00000619300 RNF222A6NCQ9 220 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 C16orf97H3BN30 126 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 IFNA21P01568 189 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 KLF3P57682 345 aaPredicted RBP16.07■□□□□ 0.16
PSPC1-206ENST00000619300 RBPJQ06330 500 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 LRTM2Q8N967 370 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 ZNF565Q8N9K5 539 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 TMEM171Q8WVE6 324 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 HEATR1Q9H583 2144 aaKnown RBP16.07■□□□□ 0.16
PSPC1-206ENST00000619300 GSKIPQ9P0R6 139 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 MPPED1O15442 326 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 CCKARP32238 428 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 CD200P41217 278 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 SLC51BQ86UW2 128 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 OR10J5Q8NHC4 309 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 GLYATL2Q8WU03 294 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 SECTM1Q8WVN6 248 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 CABLES2Q9BTV7 478 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 SLC5A7Q9GZV3 580 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 JKAMPQ9P055 326 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 TAAR3PQ9P1P4 343 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 TUBD1Q9UJT1 453 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 TRAPPC2LQ9UL33 140 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 MEMO1Q9Y316 297 aa16.07■□□□□ 0.16
PSPC1-206ENST00000619300 hCG_1807616A0A1W2PRN6 198 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 ATP6V1G2-DDX39BF2Z307 99 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 H0YIZ8 118 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 CD40P25942 277 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 CEBPDP49716 269 aaPredicted RBP16.06■□□□□ 0.16
PSPC1-206ENST00000619300 IAH1Q2TAA2 248 aaPredicted RBP16.06■□□□□ 0.16
PSPC1-206ENST00000619300 CLLU1Q5K131 121 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 GGNBP1Q5YKI7 109 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 VHLLQ6RSH7 139 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 LIAT1Q6ZQX7 453 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 LDLRAD3Q86YD5 345 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 MSI2Q96DH6 328 aaKnown RBP16.06■□□□□ 0.16
PSPC1-206ENST00000619300 KIRREL1Q96J84 757 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 GSX2Q9BZM3 304 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 BSNQ9UPA5 3926 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 IGKV1D-13A0A0B4J2D9 117 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 PSPNO60542 156 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 PTBP3O95758 552 aaKnown RBP16.06■□□□□ 0.16
PSPC1-206ENST00000619300 IGKV1-13P0DP09 117 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 RND3P61587 244 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 RPS23P62266 143 aaKnown RBP16.06■□□□□ 0.16
PSPC1-206ENST00000619300 RELL2Q8NC24 303 aaPredicted RBP16.06■□□□□ 0.16
PSPC1-206ENST00000619300 PRR7Q8TB68 274 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 MRPL24Q96A35 216 aaKnown RBP16.06■□□□□ 0.16
PSPC1-206ENST00000619300 WIPI2Q9Y4P8 454 aa16.06■□□□□ 0.16
PSPC1-206ENST00000619300 IGLV3-9A0A075B6K5 115 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 TRAV39A0A0B4J263 110 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 RPS10-NUDT3A0A1W2PQS6 291 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 KANTRA0A1W2PQU2 76 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 ZSCAN5BA6NJL1 495 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 GPR31O00270 319 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 PHF1O43189 567 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-206ENST00000619300 B3GALNT1O75752 331 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 LYL1P12980 280 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 RAB14P61106 215 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 HOXA4Q00056 320 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-206ENST00000619300 PRSS54Q6PEW0 395 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 ZNF818PQ6ZRF7 136 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 H1FOOQ8IZA3 346 aaPredicted RBP16.05■□□□□ 0.16
PSPC1-206ENST00000619300 LGI3Q8N145 548 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 DCUN1D4Q92564 292 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 C18orf12Q96KH6 178 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 MBNL3Q9NUK0 354 aaKnown RBP16.05■□□□□ 0.16
PSPC1-206ENST00000619300 OR2W1Q9Y3N9 320 aa16.05■□□□□ 0.16
PSPC1-206ENST00000619300 C3orf85A0A1B0GTC6 90 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 LINC00862A6NCI5 91 aa16.04■□□□□ 0.16
PSPC1-206ENST00000619300 NPIPB11E5RHQ5 1161 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms