RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 MRGPRX1Q96LB2 322 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 LRRC61Q9BV99 259 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 WDR13Q9H1Z4 485 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 OR2W1Q9Y3N9 320 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.3□□□□□ -1.56
RFX3-212ENST00000617270 B4DEV8 164 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 SS18L1O75177 396 aaPredicted RBP5.3□□□□□ -1.56
RFX3-212ENST00000617270 BHLHA15Q7RTS1 189 aaPredicted RBP5.3□□□□□ -1.56
RFX3-212ENST00000617270 ZNF707Q96C28 371 aaPredicted RBP5.3□□□□□ -1.56
RFX3-212ENST00000617270 MS4A7Q9GZW8 240 aaPredicted RBP5.3□□□□□ -1.56
RFX3-212ENST00000617270 C3P01024 1663 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 C7orf77A4D0Y5 90 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 LINC01387J3KSC0 135 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 SPNS2Q8IVW8 549 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 SYT8Q8NBV8 401 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 MZB1Q8WU39 189 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 MBD3L1Q8WWY6 194 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 GLRX2Q9NS18 164 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 TRDCB7Z8K6 153 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 FAM53BQ14153 422 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 MRPL30Q8TCC3 161 aaKnown RBP5.3□□□□□ -1.56
RFX3-212ENST00000617270 FAM216AQ8WUB2 273 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 MRGPRFQ96AM1 343 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 SFRP2Q96HF1 295 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 METTL26Q96S19 204 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 PCGF1Q9BSM1 259 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 A0A0A6YYD5 115 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 A0A0B4J293 547 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 FFAR1O14842 300 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 AGFG2O95081 481 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 IGF2P01344 180 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 LDLRAD1Q5T700 205 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 GUCD1Q96NT3 240 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 HSPB9Q9BQS6 159 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 RCC2Q9P258 522 aaKnown RBP5.3□□□□□ -1.56
RFX3-212ENST00000617270 VAX2Q9UIW0 290 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 TINAGQ9UJW2 476 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 PRNDQ9UKY0 176 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 KCPQ6ZWJ8 1503 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 CDIPTO14735 213 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 MMP9P14780 707 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 CCR5P51681 352 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 SPEM2Q0P670 501 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 TMEM78Q5T7P6 136 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 SLC35E3Q7Z769 313 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 ZNF275Q9NSD4 429 aaPredicted RBP5.3□□□□□ -1.56
RFX3-212ENST00000617270 IGLV3-10A0A075B6K4 115 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 DLX6P56179 175 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 CTF1Q16619 201 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 WDR25Q64LD2 544 aaPredicted RBP5.3□□□□□ -1.56
RFX3-212ENST00000617270 C17orf47Q8NEP4 570 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 PARP11Q9NR21 331 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 CCL28Q9NRJ3 127 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 R4GN57 208 aa5.3□□□□□ -1.56
RFX3-212ENST00000617270 UBR1Q8IWV7 1749 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 IGHV4-34P06331 123 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 CTSDP07339 412 aaPredicted RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 TMIGD3P0DMS9 266 aaPredicted RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 OR4D9Q8NGE8 314 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 ALG14Q96F25 216 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 RHOVQ96L33 236 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 CDX2Q99626 313 aaPredicted RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 HDHD3Q9BSH5 251 aaPredicted RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 DNAJB12Q9NXW2 375 aaKnown RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 ZBTB42B2RXF5 422 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 MPZL1O95297 269 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 SOD3P08294 240 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 ZNF735P0CB33 412 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 ZNF324BQ6AW86 544 aaPredicted RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 ZNF418Q8TF45 676 aaPredicted RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 PAXXQ9BUH6 204 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 TNFRSF12AQ9NP84 129 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 HSPB7Q9UBY9 170 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 OR51B2Q9Y5P1 312 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 CKS2P33552 79 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 C3AR1Q16581 482 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 ACER2Q5QJU3 275 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 THSD4Q6ZMP0 1018 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 OR10J6PQ8NGY7 276 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 OR10AC1Q8NH08 325 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 WNT5BQ9H1J7 359 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 PPM1DO15297 605 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 HOXA6P31267 233 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 CIRBPQ14011 172 aaKnown RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 UBE2V2Q15819 145 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 TEPPQ6URK8 271 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 COPS9Q8WXC6 57 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 C16orf92Q96LL3 132 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 INSIG2Q9Y5U4 225 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 TMEM131LA2VDJ0 1609 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 C7orf71A4D174 169 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 SLC25A1P53007 311 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 NUBP1P53384 320 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 Q5PR19 223 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 STXBP6Q8NFX7 210 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 SGMS2Q8NHU3 365 aa5.29□□□□□ -1.56
RFX3-212ENST00000617270 MRPL24Q96A35 216 aaKnown RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 CITED2Q99967 270 aaPredicted RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 C11orf68Q9H3H3 251 aaKnown RBP5.29□□□□□ -1.56
RFX3-212ENST00000617270 HEXA-AS1Q9H8Q6 139 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms