RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 PAX8Q06710 450 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 TCF23Q7RTU1 214 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 TRAPPC6BQ86SZ2 158 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 MIXL1Q9H2W2 232 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 NCOR1P1Q9H4R4 102 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 YAE1D1Q9NRH1 226 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 ONECUT1Q9UBC0 465 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 LPAR3Q9UBY5 353 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
PCDHGC3-204ENST00000617222 DOCK11Q5JSL3 2073 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 TRGV10A0A0A0MS01 117 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 A0A0G2JMP0 313 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 A0A0X1KG70 313 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 MFNGO00587 321 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 XRCC3O43542 346 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 CA11O75493 328 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 CCL3L1P16619 93 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 ZNF260Q3ZCT1 412 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 CLEC9AQ6UXN8 241 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 OR4M2Q8NGB6 313 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 OR13A1Q8NGR1 328 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 OR4K15Q8NH41 348 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 MRGPRDQ8TDS7 321 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 CORO2AQ92828 525 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 CMSS1Q9BQ75 279 aaKnown RBP12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 HDHD3Q9BSH5 251 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 GSX1Q9H4S2 264 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 C7orf69Q9H7B7 122 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 CHMP1AQ9HD42 196 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 OR6C3Q9NZP0 311 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 ELF5Q9UKW6 265 aaPredicted RBP12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 TRAPPC2LQ9UL33 140 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 KCNS2Q9ULS6 477 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 LINC00312Q9Y6C7 94 aa12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 YLPM1P49750 1951 aaKnown RBP12.86□□□□□ -0.35
PCDHGC3-204ENST00000617222 A0A1W2PPH5 198 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 CD3GP09693 182 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 ZNF728P0DKX0 622 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 GATA3P23771 443 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 GLP1RP43220 463 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 MADCAM1Q13477 382 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 ARFRP1Q13795 201 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 ARL6IP1Q15041 203 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 TMEM69Q5SWH9 247 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 LAX1Q8IWV1 398 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 GAPTQ8N292 157 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 ZNF565Q8N9K5 539 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 MRPL30Q8TCC3 161 aaKnown RBP12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 DMRTB1Q96MA1 342 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 MMP27Q9H306 513 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 ADAM30Q9UKF2 790 aa12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 MRPS7Q9Y2R9 242 aaKnown RBP12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 UBE2J1Q9Y385 318 aaPredicted RBP12.85□□□□□ -0.35
PCDHGC3-204ENST00000617222 TMEM235A6NFC5 223 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 SERPINE3A8MV23 424 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 J3QLI3 93 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 GSTP1P09211 210 aaKnown RBP12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 DLX6P56179 175 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 ERVFRD-1P60508 538 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 MRPS15P82914 257 aaKnown RBP12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 CNPY1Q3B7I2 92 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 HACD4Q5VWC8 232 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 SETD6Q8TBK2 473 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 ZNF714Q96N38 554 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 TMPRSS13Q9BYE2 586 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 RIMS4Q9H426 269 aaPredicted RBP12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 AUNIPQ9H7T9 357 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 EXTL2Q9UBQ6 330 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 KPTNQ9Y664 436 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 AUP1Q9Y679 476 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 A3GALT2U3KPV4 340 aa12.84□□□□□ -0.35
PCDHGC3-204ENST00000617222 MAST4O15021 2626 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 A8MV72 311 aaPredicted RBP12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 M0R1W7 72 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 TOX4O94842 621 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 NAPSAO96009 420 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 AVPP01185 164 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 CGB3P0DN86 165 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 CGB7P0DN87 165 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 PTHLHP12272 177 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 RCC1P18754 421 aaPredicted RBP12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 GZMHP20718 246 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 TALDO1P37837 337 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 MNDAP41218 407 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 TAS2R20P59543 309 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 GNG2P59768 71 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 PNLIPRP3Q17RR3 467 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 C17orf58Q2M2W7 97 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 CR1LQ2VPA4 569 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 METTL11BQ5VVY1 283 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 CNIH2Q6PI25 160 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 Q71RC1 249 aaPredicted RBP12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 C11orf42Q8N5U0 333 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 KIR3DL3Q8N743 410 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 Q8N7P7 452 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 DIRAS2Q96HU8 199 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 WDFY2Q96P53 400 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 PCGF1Q9BSM1 259 aa12.83□□□□□ -0.36
PCDHGC3-204ENST00000617222 SIRPDQ9H106 197 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms