RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 NKX6-1P78426 367 aaPredicted RBP6.57□□□□□ -1.36
NEK3-207ENST00000617054 ACTBL2Q562R1 376 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 MBNL2Q5VZF2 373 aaKnown RBP6.57□□□□□ -1.36
NEK3-207ENST00000617054 TMEM211Q6ICI0 200 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 MOGAT3Q86VF5 341 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 MRPL30Q8TCC3 161 aaKnown RBP6.57□□□□□ -1.36
NEK3-207ENST00000617054 SECTM1Q8WVN6 248 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 KIRREL1Q96J84 757 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 OR2A7Q96R45 310 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 PHB2Q99623 299 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 PKIBQ9C010 78 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 CXXC4Q9H2H0 198 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 Q9N2K0 584 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 RCC2Q9P258 522 aaKnown RBP6.57□□□□□ -1.36
NEK3-207ENST00000617054 IGKV1D-13A0A0B4J2D9 117 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 TEX13DA0A0J9YY54 714 aaPredicted RBP6.57□□□□□ -1.36
NEK3-207ENST00000617054 PLSCR5A0PG75 271 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 NAPSAO96009 420 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 HOXD4P09016 255 aaPredicted RBP6.57□□□□□ -1.36
NEK3-207ENST00000617054 IGKV1-13P0DP09 117 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 PPP3CBP16298 524 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 FPR2P25090 351 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 SERPINF1P36955 418 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 PMELP40967 661 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 KLF3P57682 345 aaPredicted RBP6.57□□□□□ -1.36
NEK3-207ENST00000617054 CCL8P80075 99 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 KLRB1Q12918 225 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 UNQ6126/PRO20091Q6UXV3 157 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 FOXRED2Q8IWF2 684 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 ASCC1Q8N9N2 400 aaKnown RBP6.57□□□□□ -1.36
NEK3-207ENST00000617054 DEFB108BQ8NET1 73 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 LRRC29Q8WV35 223 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 MITD1Q8WV92 249 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 DCTN5Q9BTE1 182 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 RDH8Q9NYR8 311 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 OR1A1Q9P1Q5 309 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 POLDIP2Q9Y2S7 368 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 MEMO1Q9Y316 297 aa6.57□□□□□ -1.36
NEK3-207ENST00000617054 HAND1O96004 215 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 IGHV3-13P01766 116 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 IGHV3-7P01780 117 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 RBPJQ06330 500 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 GRK1Q15835 563 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 MPV17LQ2QL34 196 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 SPIN3Q5JUX0 258 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 DHRS11Q6UWP2 260 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 LIAT1Q6ZQX7 453 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 PEG10Q86TG7 708 aaKnown RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 LDLRAD3Q86YD5 345 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 ITLN1Q8WWA0 313 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 PARP12Q9H0J9 701 aaKnown RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 GSKIPQ9P0R6 139 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 EPG5Q9HCE0 2579 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 A0A1B0GW55 424 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 HSD17B6O14756 317 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 CA11O75493 328 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 DUS4LO95620 317 aaKnown RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 GIPP09681 153 aaPredicted RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 DUX4L2P0CJ85 424 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 DUX4L3P0CJ86 424 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 DUX4L4P0CJ87 422 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 DUX4L5P0CJ88 424 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 DUX4L6P0CJ89 424 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 DUX4L7P0CJ90 424 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 ZNF728P0DKX0 622 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 ZNF250P15622 560 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 RPS2P15880 293 aaKnown RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 GLRXP35754 106 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 C6orf183Q5T699 404 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 DUX4L9Q6RFH8 374 aaPredicted RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 OR8H1Q8NGG4 311 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 RFESDQ8TAC1 157 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 PPP1R1CQ8WVI7 109 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 RBMXL1Q96E39 390 aaKnown RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 OR10C1Q96KK4 312 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 METTL8Q9H825 291 aaKnown RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 DUX4Q9UBX2 424 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 TRAPPC2LQ9UL33 140 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 C14orf166Q9Y224 244 aaKnown RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 DSCAMO60469 2012 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 TRAV14DV4A0A0A6YYC5 116 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 SH2D1BO14796 132 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 MPC2O95563 127 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 CYB5R3P00387 301 aaPredicted RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 CFDP00746 253 aaPredicted RBP6.56□□□□□ -1.36
NEK3-207ENST00000617054 PLAUP00749 431 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 PPYP01298 95 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 SELLP14151 372 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 GABRA2P47869 451 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 EDDM3AQ14507 147 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 LTC4SQ16873 150 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 NHLRC3Q5JS37 347 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 TMEM108Q6UXF1 575 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 ACP7Q6ZNF0 438 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 ZNRF1Q8ND25 227 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 OR5M8Q8NGP6 311 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 DMRTA2Q96SC8 542 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 ATP23Q9Y6H3 246 aa6.56□□□□□ -1.36
NEK3-207ENST00000617054 USP24Q9UPU5 2620 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms