RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	ECI1	P42126	302 aa		11.94	□□□□□ -0.5
CACNA1C-231	ENST00000616390	HTD2	P86397	168 aa		11.94	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TMEM187	Q14656	261 aa		11.94	□□□□□ -0.5
CACNA1C-231	ENST00000616390	NSUN5P2	Q63ZY6	315 aa		11.94	□□□□□ -0.5
CACNA1C-231	ENST00000616390	EXTL1	Q92935	676 aa		11.94	□□□□□ -0.5
CACNA1C-231	ENST00000616390	FGF23	Q9GZV9	251 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNA1C-231	ENST00000616390	LPAR3	Q9UBY5	353 aa		11.94	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TTC28	Q96AY4	2481 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	ARHGAP21	Q5T5U3	1957 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390		A0A1W2PR80	420 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	HS3ST1	O14792	307 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	LILRA1	O75019	489 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	SCT	P09683	121 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	H2AFB1	P0C5Y9	115 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	MST1L	Q2TV78	715 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	KRTAP27-1	Q3LI81	207 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	HIKESHI	Q53FT3	197 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	CBLN2	Q8IUK8	224 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	IL22RA1	Q8N6P7	574 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	APH1A	Q96BI3	265 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	ZNF552	Q9H707	407 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	DNAJB11	Q9UBS4	358 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	SYNGR1	O43759	233 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	SNRNP70	P08621	437 aa	Known RBP	11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	FBXW12	Q6X9E4	464 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	ASCL4	Q6XD76	172 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	GLYATL2	Q8WU03	294 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TP53RK	Q96S44	253 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TMEM100	Q9NV29	134 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	ABI3	Q9P2A4	366 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	PRSS50	Q9UI38	385 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	LIPG	Q9Y5X9	500 aa		11.93	□□□□□ -0.5
CACNA1C-231	ENST00000616390	ITGB1BP1	O14713	200 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TNFSF12	O43508	249 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TNFSF15	O95150	251 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	ADAMTS17	Q8TE56	1095 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	RHOF	Q9HBH0	211 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	PLA2G2E	Q9NZK7	142 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	IL19	Q9UHD0	177 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	ZNF391	Q9UJN7	358 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390		A0A1W2PN81	502 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	PPY	P01298	95 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	CHRNA7	P36544	502 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	MEOX1	P50221	254 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	NHLH2	Q02577	135 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	DAZAP2	Q15038	168 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TMEM268	Q5VZI3	342 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	HAGHL	Q6PII5	290 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	REC114	Q7Z4M0	266 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	C17orf78	Q8N4C9	275 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	HPSE2	Q8WWQ2	592 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	RDH5	Q92781	318 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	PRDM14	Q9GZV8	571 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	GTF3C1	Q12789	2109 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	HSD17B6	O14756	317 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TGIF1	Q15583	401 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TMPRSS7	Q7RTY8	843 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	LDLRAD3	Q86YD5	345 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	SLC35G3	Q8N808	338 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	SYT3	Q9BQG1	590 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	REPIN1	Q9BWE0	567 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	SPRY4	Q9C004	299 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	MMP26	Q9NRE1	261 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	MTCH1	Q9NZJ7	389 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TP53TG5	Q9Y2B4	290 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	AMDHD2	Q9Y303	409 aa		11.92	□□□□□ -0.5
CACNA1C-231	ENST00000616390	CACNA1H	O95180	2353 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	MAP1B	P46821	2468 aa	Known RBP	11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	SP9	P0CG40	484 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	OMG	P23515	440 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	FHIT	P49789	147 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	PJVK	Q0ZLH3	352 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	UQCC3	Q6UW78	93 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	LIAT1	Q6ZQX7	453 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390		Q6ZRG5	221 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	ZDHHC23	Q8IYP9	409 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	SVBP	Q8N300	66 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	HSD17B11	Q8NBQ5	300 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	HIST1H2AA	Q96QV6	131 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	DDA1	Q9BW61	102 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	SEPSECS	Q9HD40	501 aa	Known RBP	11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	UQCC1	Q9NVA1	299 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TUBD1	Q9UJT1	453 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TRAV39	A0A0B4J263	110 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TRAPPC2L	H3BP13	241 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	MT-CO3	P00414	261 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	CST4	P01036	141 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	CD59	P13987	128 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	CD80	P33681	288 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	ZNF616	Q08AN1	781 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	ZNF528	Q3MIS6	628 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	UBALD1	Q8TB05	177 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	TMEM45B	Q96B21	275 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	MAGT1	Q9H0U3	335 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	DECR2	Q9NUI1	292 aa		11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1C-231	ENST00000616390	DMXL1	Q9Y485	3027 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms