RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CT62P0C5K7 136 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 HOXA6P31267 233 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 METAP1P53582 386 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 RPL30P62888 115 aaKnown RBP4.02□□□□□ -1.77
CHD9-221ENST00000615216 LSM11P83369 360 aaKnown RBP eCLIP4.02□□□□□ -1.77
CHD9-221ENST00000615216 AWAT1Q58HT5 328 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 INO80CQ6PI98 192 aaPredicted RBP4.02□□□□□ -1.77
CHD9-221ENST00000615216 OR10A7Q8NGE5 316 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 TMEM37Q8WXS4 190 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 RASL11BQ9BPW5 248 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 PRSS50Q9UI38 385 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 PCOLCE2Q9UKZ9 415 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 A0A0U1RQV5 110 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 LINC00862A6NCI5 91 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 FFAR1O14842 300 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 NAT2P11245 290 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 CRISP2P16562 243 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 CTGFP29279 349 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 SLC35E3Q7Z769 313 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 ABHD1Q96SE0 405 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 COA4Q9NYJ1 87 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 NAGKQ9UJ70 344 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 RPL36A-HNRNPH2H7BZ11 118 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 F2RL2O00254 374 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 OR3A1P47881 315 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 TIAL1Q01085 375 aaKnown RBP eCLIP4.02□□□□□ -1.773e-8■■■■■ 28.9
CHD9-221ENST00000615216 OR5A2Q8NGI9 324 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 C5orf67F2Z3F1 127 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 F5H697 171 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 IFNL4K9M1U5 179 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 GEMIN2O14893 280 aaKnown RBP4.02□□□□□ -1.77
CHD9-221ENST00000615216 PPYP01298 95 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 APCSP02743 223 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 GZMHP20718 246 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 PPOXP50336 477 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 PKIAP61925 76 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 INSL4Q14641 139 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 UFC1Q9Y3C8 167 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 CTXND1A0A1B0GTU2 59 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 A0A1W2PNV4 684 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 SRSF10O75494 262 aaKnown RBP4.02□□□□□ -1.77
CHD9-221ENST00000615216 HPXP02790 462 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 LIFP15018 202 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 ID1P41134 155 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 MRPS11P82912 194 aaKnown RBP4.02□□□□□ -1.77
CHD9-221ENST00000615216 BSXQ3C1V8 233 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 OTPQ5XKR4 325 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 CCDC144NLQ6NUI1 221 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 VWA1Q6PCB0 445 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 PRSS41Q7RTY9 318 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 RNF133Q8WVZ7 376 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 WDR13Q9H1Z4 485 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 ZNF665Q9H7R5 613 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 OPN4Q9UHM6 478 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 TCFL5Q9UL49 500 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 TRAV20A0A0B4J274 112 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 J3QT63 122 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 LYZL6O75951 148 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 DRD3P35462 400 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 SNRPEP62304 92 aaKnown RBP4.02□□□□□ -1.77
CHD9-221ENST00000615216 HLA-DRB5Q30154 266 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 ZNF260Q3ZCT1 412 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 Q6ZS52 159 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 AMER3Q8N944 861 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 ZG16BQ96DA0 208 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 GPR35Q9HC97 309 aa4.02□□□□□ -1.77
CHD9-221ENST00000615216 MBD1Q9UIS9 605 aaPredicted RBP4.02□□□□□ -1.77
CHD9-221ENST00000615216 CYR61O00622 381 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 HIST1H1BP16401 226 aaKnown RBP4.01□□□□□ -1.77
CHD9-221ENST00000615216 TMEM50BP56557 158 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 DLK1P80370 383 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 ZP4Q12836 540 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 TNXAQ16473 311 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 SPNS3Q6ZMD2 512 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 Q6ZN92 141 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 LILRB1Q8NHL6 650 aaPredicted RBP4.01□□□□□ -1.77
CHD9-221ENST00000615216 UBALD1Q8TB05 177 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 RASL10BQ96S79 203 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 SAP30LQ9HAJ7 183 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 TRBV5-3A0A0A0MS03 114 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 RD3LP0DJH9 198 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 CLDN18P56856 261 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 TRIP6Q15654 476 aaKnown RBP4.01□□□□□ -1.77
CHD9-221ENST00000615216 SLC23A3Q6PIS1 610 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 HOGA1Q86XE5 327 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 GAPTQ8N292 157 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 CCL17Q92583 94 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 PACRGQ96M98 296 aaPredicted RBP4.01□□□□□ -1.77
CHD9-221ENST00000615216 DUSP15Q9H1R2 295 aaPredicted RBP4.01□□□□□ -1.77
CHD9-221ENST00000615216 FLRT3Q9NZU0 649 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 HELTA6NFD8 242 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 HOXD4P09016 255 aaPredicted RBP4.01□□□□□ -1.77
CHD9-221ENST00000615216 TMEM116Q8NCL8 245 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 PLAC1Q9HBJ0 212 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 RNF7Q9UBF6 113 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 TCRBV16S1A1N1A0A5B0 115 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 OR2W5A6NFC9 320 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 OR4C45A6NMZ5 311 aa4.01□□□□□ -1.77
CHD9-221ENST00000615216 ZNF207O43670 478 aaKnown RBP4.01□□□□□ -1.77
CHD9-221ENST00000615216 SMPD2O60906 423 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms