RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 PGA4P0DJD7 388 aa18.95■□□□□ 0.62
POLR2J3-220ENST00000613744 PGA5P0DJD9 388 aa18.95■□□□□ 0.62
POLR2J3-220ENST00000613744 ABCA11PQ4W5N1 156 aa18.95■□□□□ 0.62
POLR2J3-220ENST00000613744 SLC25A26Q70HW3 274 aa18.95■□□□□ 0.62
POLR2J3-220ENST00000613744 MRPL52Q86TS9 123 aaKnown RBP18.95■□□□□ 0.62
POLR2J3-220ENST00000613744 KLHL13Q9P2N7 655 aa18.95■□□□□ 0.62
POLR2J3-220ENST00000613744 ANXA10Q9UJ72 324 aa18.95■□□□□ 0.62
POLR2J3-220ENST00000613744 MS4A18H0YCH9 400 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 ZNF728P0DKX0 622 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 TMPRSS3P57727 454 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 MLF1P58340 268 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 MS4A18Q3C1V0 323 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 ZNF468Q5VIY5 522 aaPredicted RBP18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 C5orf24Q7Z6I8 188 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 FDCSPQ8NFU4 85 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 OR1P1Q8NH06 330 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 RTN4IP1Q8WWV3 396 aaPredicted RBP18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 RTN4RQ9BZR6 473 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 SRD5A3Q9H8P0 318 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 ZNF701Q9NV72 531 aaPredicted RBP18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 OR14J1Q9UGF5 321 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 VAX2Q9UIW0 290 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 LOC102723971A0A1B0GUV8 181 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 CYTIPO60759 359 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 CDS2O95674 445 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 SNRPCP09234 159 aaKnown RBP18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 HLA-DOBP13765 273 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 CD200P41217 278 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 LYZL2Q7Z4W2 148 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 ABHD12BQ7Z5M8 362 aaPredicted RBP18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 ZFP62Q8NB50 900 aaPredicted RBP18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 DNAJA3Q96EY1 480 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 ADGRG7Q96K78 797 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 SNX22Q96L94 193 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 PLEKHF2Q9H8W4 249 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 NECAP2Q9NVZ3 263 aa18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 DSPP15924 2871 aaKnown RBP18.94■□□□□ 0.62
POLR2J3-220ENST00000613744 ATMQ13315 3056 aa18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 TK1P04183 234 aa18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 RPL23AP62750 156 aaKnown RBP18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 OR10A7Q8NGE5 316 aa18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 MSI2Q96DH6 328 aaKnown RBP18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 DHRS7CA6NNS2 312 aa18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 C17orf51A8MQB3 221 aa18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 GEMIN2O14893 280 aaKnown RBP18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 CEBPGP53567 150 aa18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 SRPXP78539 464 aa18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 OR8B12Q8NGG6 310 aa18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 ACY3Q96HD9 319 aa18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 ANGPTL4Q9BY76 406 aa18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 PLA2G3Q9NZ20 509 aa18.93■□□□□ 0.62
POLR2J3-220ENST00000613744 PTPRQQ9UMZ3 2332 aa18.92■□□□□ 0.62
POLR2J3-220ENST00000613744 IGKV1D-8A0A087WSZ0 117 aa18.92■□□□□ 0.62
POLR2J3-220ENST00000613744 IGKV1D-43A0A0B4J1Z2 117 aa18.92■□□□□ 0.62
POLR2J3-220ENST00000613744 UCP3P55916 312 aa18.92■□□□□ 0.62
POLR2J3-220ENST00000613744 H1FNTQ75WM6 255 aaPredicted RBP18.92■□□□□ 0.62
POLR2J3-220ENST00000613744 COMMD2Q86X83 199 aa18.92■□□□□ 0.62
POLR2J3-220ENST00000613744 OR10G3Q8NGC4 313 aa18.92■□□□□ 0.62
POLR2J3-220ENST00000613744 OR52M1Q8NGK5 317 aa18.92■□□□□ 0.62
POLR2J3-220ENST00000613744 EXTL1Q92935 676 aa18.92■□□□□ 0.62
POLR2J3-220ENST00000613744 ZNF552Q9H707 407 aaPredicted RBP18.92■□□□□ 0.62
POLR2J3-220ENST00000613744 EREGO14944 169 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 METTL15P1P0C7V9 234 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 MMP9P14780 707 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 ZNF17P17021 662 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 DTYMKP23919 212 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 SSR4P51571 173 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 FOXF1Q12946 379 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 RAB35Q15286 201 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 ABHD17BQ5VST6 288 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 TGIF2LYQ8IUE0 185 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 NOXO1Q8NFA2 376 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 GPR119Q8TDV5 335 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 PYGO2Q9BRQ0 406 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 ALPK2Q86TB3 2170 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 C2orf72A6NCS6 295 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 MARCH11A6NNE9 402 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 M0R143 59 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 FUT3P21217 361 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 PDLIM4P50479 330 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 HSF1Q00613 529 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 BAXQ07812 192 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 KISS1Q15726 138 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 CCDC71LQ8N9Z2 235 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 OR4X1Q8NH49 305 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 CISD1Q9NZ45 108 aaKnown RBP18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 MCTS1Q9ULC4 181 aaKnown RBP18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 V9GYS6 101 aa18.91■□□□□ 0.62
POLR2J3-220ENST00000613744 BOD1L1Q8NFC6 3051 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 IGKV1-9A0A0C4DH69 117 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 IL18BPO95998 194 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 UCNP55089 124 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 GAGE1Q13065 139 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 FAM90A2PQ658T7 463 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 GPR137CQ8N3F9 429 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 OR2AJ1Q8NGZ0 328 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 HAS2Q92819 552 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 SPACA9Q96E40 222 aaPredicted RBP18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 SPIN2AQ99865 258 aa18.9■□□□□ 0.62
POLR2J3-220ENST00000613744 SPIN2BQ9BPZ2 258 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms