RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 OR10G9Q8NGN4 311 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 OR10G7Q8NGN6 311 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 SPSB1Q96BD6 273 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 CD5LO43866 347 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 RPS24P62847 133 aaKnown RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 FIGLAQ6QHK4 219 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 PLPPR1Q8TBJ4 325 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 IRF7Q92985 503 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 CGGBP1Q9UFW8 167 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 PPBPP02775 128 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 RPS15AP62244 130 aaKnown RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 ARL16Q0P5N6 197 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 SRSF6Q13247 344 aaKnown RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 RUNX2Q13950 521 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 SAMD5Q5TGI4 173 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 SAMD7Q7Z3H4 446 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 OR2V1Q8NHB1 315 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 ZNF480Q8WV37 535 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 OR4C12Q96R67 309 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 BOCQ9BWV1 1114 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 VN1R1Q9GZP7 353 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 FCF1Q9Y324 198 aaKnown RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 J3QR06 171 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 CAPZBP47756 277 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 SUB1P53999 127 aaKnown RBP eCLIP4.39□□□□□ -1.711e-6■■□□□ 12.7
VPS13D-213ENST00000613099 SLCO4C1Q6ZQN7 724 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 Q6ZVU0 165 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 SCAMP5Q8TAC9 235 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 AQP3Q92482 292 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 IGSF8Q969P0 613 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 HMGN4O00479 90 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 LGALS2P05162 132 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 TSPOP30536 169 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 PCBD1P61457 104 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 MRPL2Q5T653 305 aaKnown RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 KLHDC8AQ8IYD2 350 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 POM121L2Q96KW2 1035 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 CHRNA10Q9GZZ6 450 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 IGHG1P01857 330 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 GAGE13Q4V321 117 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 OR2I1PQ8NGU4 316 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 ZNF707Q96C28 371 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 MRPL18Q9H0U6 180 aaKnown RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 ANXA10Q9UJ72 324 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 SCN5AQ14524 2016 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 A0A0A6YYC8 382 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 TRAV1-1A0A0B4J248 108 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 RNF222A6NCQ9 220 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 AHRRA9YTQ3 701 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 I3L1I5 382 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 PSG1P11464 419 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 RIGQ13278 110 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 SPANXN5Q5MJ07 72 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 HIST1H1AQ02539 215 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 NUS1Q96E22 293 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 CCL27Q9Y4X3 112 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 H0Y980 276 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 LINC00116Q8NCU8 138 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 SUSD6Q92537 303 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 C10orf35Q96D05 121 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 TXNRD2Q9NNW7 524 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 SMCHD1A6NHR9 2005 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 C1QAP02745 245 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 FCGR2AP12318 317 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 TRNP1Q6NT89 227 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 PELI1Q96FA3 418 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 MS4A5Q9H3V2 200 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 AKIRIN1Q9H9L7 192 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 GREB1LQ9C091 1923 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-213ENST00000613099 ANAPC1Q9H1A4 1944 aa4.39□□□□□ -1.71
VPS13D-213ENST00000613099 A0A0G2JLM5 398 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 A0A1B0GWA3 101 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 TMEM150CB9EJG8 249 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 BIVMQ86UB2 503 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 CRYGNQ8WXF5 182 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 MARS2Q96GW9 593 aaKnown RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 RAMP1O60894 148 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 TUSC2O75896 110 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 APOMO95445 188 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 GUCA2AQ02747 115 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 ASCL4Q6XD76 172 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 MUC15Q8N387 334 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 C17orf47Q8NEP4 570 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 TMEM255BQ8WV15 326 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 SGK494Q96LW2 274 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 SH2D2AQ9NP31 389 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 PSG11Q9UQ72 335 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 H2BFWTQ7Z2G1 175 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 MKXQ8IYA7 352 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 QTRT1Q9BXR0 403 aaKnown RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 IGSF23A1L1A6 192 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 RER1O15258 196 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 PRSS1P07477 247 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 CPMP14384 443 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 TGIF1Q15583 401 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 METTL7AQ9H8H3 244 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 CTXND1A0A1B0GTU2 59 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 LRRC3CA6NJW4 275 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 SMIM10L2AP0DMW4 78 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 SMIM10L2BP0DMW5 78 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms