RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PI3P19957 117 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 HOXD9P28356 352 aaPredicted RBP7.79□□□□□ -1.16
TTC28-208ENST00000612946 FGF8P55075 233 aaPredicted RBP7.79□□□□□ -1.16
TTC28-208ENST00000612946 OR1D5P58170 312 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 EFNB1P98172 346 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 NKG7Q16617 165 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 VMA21Q3ZAQ7 101 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 DUSP23Q9BVJ7 150 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 RABAC1Q9UI14 185 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 S1PR2O95136 353 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 AGAP20933 346 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 MLF1P58340 268 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 GGTLC2Q14390 218 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 ANKRD37Q7Z713 158 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 SSBP4Q9BWG4 385 aaPredicted RBP7.79□□□□□ -1.16
TTC28-208ENST00000612946 PISDQ9UG56 409 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 WNT6Q9Y6F9 365 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 H0YIG0 161 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 MEF2CQ06413 473 aaPredicted RBP7.79□□□□□ -1.16
TTC28-208ENST00000612946 DEFB132Q7Z7B7 95 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 NPDC1Q9NQX5 325 aaPredicted RBP7.79□□□□□ -1.16
TTC28-208ENST00000612946 TAAR3PQ9P1P4 343 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 CHST1O43916 411 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 GJB5O95377 273 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 HPRT1P00492 218 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 ADRA2AP08913 450 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 EWSR1Q01844 656 aaKnown RBP eCLIP7.79□□□□□ -1.16
TTC28-208ENST00000612946 OR6X1Q8NH79 312 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 NAT6Q93015 286 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 FBXO17Q96EF6 278 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 GUCA2AQ02747 115 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 MRPL18Q9H0U6 180 aaKnown RBP7.79□□□□□ -1.16
TTC28-208ENST00000612946 OR51B2Q9Y5P1 312 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 ASPDHA6ND91 283 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 KBTBD11O94819 623 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 NXPH3O95157 252 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 ONECUT2O95948 504 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 BCORP1Q8N888 145 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 RND1Q92730 232 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 DNAJA3Q96EY1 480 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 SLC26A1Q9H2B4 701 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 LAMTOR2Q9Y2Q5 125 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 FRG2CA6NGY1 282 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 HSPB6O14558 160 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 SNAI3Q3KNW1 292 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 CDC14CA4D256 554 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 S100A4P26447 101 aaKnown RBP7.79□□□□□ -1.16
TTC28-208ENST00000612946 LTC4SQ16873 150 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 METRNLQ641Q3 311 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 TP53INP2Q8IXH6 220 aa7.79□□□□□ -1.16
TTC28-208ENST00000612946 GLRA1P23415 457 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 KISS1Q15726 138 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 ZNF362Q5T0B9 420 aaPredicted RBP7.78□□□□□ -1.16
TTC28-208ENST00000612946 CD200R1LQ6Q8B3 271 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 C17orf78Q8N4C9 275 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 PCNX2A6NKB5 2137 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 C1SP09871 688 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 COMPP49747 757 aaPredicted RBP7.78□□□□□ -1.16
TTC28-208ENST00000612946 MVDP53602 400 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 CKS1BP61024 79 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 ZNF506Q5JVG8 444 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 MVB12AQ96EY5 273 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 TAF1LQ8IZX4 1826 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 EDDM3BP56851 147 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 SRSF5Q13243 272 aaKnown RBP7.78□□□□□ -1.16
TTC28-208ENST00000612946 PRTGQ2VWP7 1150 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 TSPAN32Q96QS1 320 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 C11orf68Q9H3H3 251 aaKnown RBP7.78□□□□□ -1.16
TTC28-208ENST00000612946 RBKSQ9H477 322 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 LRP5O75197 1615 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 NRXN3Q9Y4C0 1643 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 UPK1AO00322 258 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 SLC25A17O43808 307 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 RELBQ01201 579 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 PAPPA-AS1Q5QFB9 102 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 ACP1P24666 158 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 MAJINQ3KP22 176 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 MSRB3Q8IXL7 192 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 MORN4Q8NDC4 146 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 NOXO1Q8NFA2 376 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 OR1N2Q8NGR9 330 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 LSM10Q969L4 123 aaKnown RBP7.78□□□□□ -1.16
TTC28-208ENST00000612946 SPCS1Q9Y6A9 102 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 MBLAC1A4D2B0 266 aaPredicted RBP7.78□□□□□ -1.16
TTC28-208ENST00000612946 H0Y980 276 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 TMPRSS11DO60235 418 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 NMUP48645 174 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 CAMPP49913 170 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 TMEM249Q2WGJ8 235 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 SLC25A26Q70HW3 274 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 NFAM1Q8NET5 270 aaPredicted RBP7.78□□□□□ -1.16
TTC28-208ENST00000612946 ZNF346Q9UL40 294 aaKnown RBP7.78□□□□□ -1.16
TTC28-208ENST00000612946 DAPP1Q9UN19 280 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 A0A1B0GW64 132 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 C1QTNF9BB2RNN3 333 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 MOSPD3O75425 235 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 CA7P43166 264 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 WDR38Q5JTN6 314 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 TMEM215Q68D42 235 aa7.78□□□□□ -1.16
TTC28-208ENST00000612946 HOGA1Q86XE5 327 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms