RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 IL13RA2Q14627 380 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 EXT1Q16394 746 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 MPV17LQ2QL34 196 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 C9orf152Q5JTZ5 239 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 AKR1C8PQ5T2L2 129 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 GPR157Q5UAW9 335 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 C20orf204Q6ZNR8 217 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 LINC00696Q6ZRV3 163 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 TUSC5Q8IXB3 177 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 TMEM222Q9H0R3 208 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 PCED1AQ9H1Q7 454 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 PPP1R3CQ9UQK1 317 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 CEP192Q8TEP8 1941 aa12.07□□□□□ -0.48
COL6A1-207ENST00000612273 A0A0G2JRQ6 117 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 ZNF503-AS2A6NEH8 195 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 CST2P09228 141 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 MLF1P58340 268 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 RAB11AP62491 216 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 HERPUD1Q15011 391 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 OR2V1Q8NHB1 315 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 ERRFI1Q9UJM3 462 aaPredicted RBP12.06□□□□□ -0.48
COL6A1-207ENST00000612273 OR6C6A6NF89 314 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 TRDCB7Z8K6 153 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 HSPA12AO43301 675 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 RPL23AP62750 156 aaKnown RBP12.06□□□□□ -0.48
COL6A1-207ENST00000612273 CMTM1Q8IZ96 169 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 FGF23Q9GZV9 251 aaPredicted RBP12.06□□□□□ -0.48
COL6A1-207ENST00000612273 MTCH1Q9NZJ7 389 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 KCNS2Q9ULS6 477 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 USF3Q68DE3 2245 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 TGIF2-C20orf24A0A0A6YYL0 155 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 SLC22A20A6NK97 555 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 K7N7A8 449 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 DAZAP2Q15038 168 aaPredicted RBP12.06□□□□□ -0.48
COL6A1-207ENST00000612273 FAM209BQ5JX69 171 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 TCEAL6Q6IPX3 200 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 OR4D5Q8NGN0 318 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 DCHS1Q96JQ0 3298 aa12.06□□□□□ -0.48
COL6A1-207ENST00000612273 GJE1A6NN92 205 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 METTL15P1P0C7V9 234 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 FKBP2P26885 142 aaKnown RBP12.05□□□□□ -0.48
COL6A1-207ENST00000612273 B3GALT5-AS1P59052 145 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 DLK1P80370 383 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 ZNF239Q16600 458 aaKnown RBP12.05□□□□□ -0.48
COL6A1-207ENST00000612273 SELENOHQ8IZQ5 122 aaKnown RBP12.05□□□□□ -0.48
COL6A1-207ENST00000612273 IL22RA1Q8N6P7 574 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 CPT1CQ8TCG5 803 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 DECR2Q9NUI1 292 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 TRAPPC2LH3BP13 241 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 SERPINE2P07093 398 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 ELLP55199 621 aaPredicted RBP12.05□□□□□ -0.48
COL6A1-207ENST00000612273 ZNF266Q14584 549 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 ZNF429Q86V71 674 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 ZNF100Q8IYN0 542 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 PRDM6Q9NQX0 595 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 WSB1Q9Y6I7 421 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 IGKV1-6A0A0C4DH72 117 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 WDR1O75083 606 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 CXCL1P09341 107 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 PSG2P11465 335 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 AGAP20933 346 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 GFI1BQ5VTD9 330 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 PLEKHF2Q9H8W4 249 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 LRFN1Q9P244 771 aa12.05□□□□□ -0.48
COL6A1-207ENST00000612273 COL5A1P20908 1838 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-207ENST00000612273 CYB5BO43169 146 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 LY86O95711 162 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 STARD6P59095 220 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 CTAG1AP78358 180 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 HMGN3Q15651 99 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 TRIM61Q5EBN2 209 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 LYPD6BQ8NI32 183 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 HIST1H2AAQ96QV6 131 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 VSIRQ9H7M9 311 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 OR1A1Q9P1Q5 309 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 CADP27708 2225 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 LRRC3CA6NJW4 275 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 CA11O75493 328 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 RHBDL1O75783 438 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 FGF5P12034 268 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 SRD5A2P31213 254 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 CYB561P49447 251 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 OR2T2Q6IF00 324 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 FAM53AQ6NSI3 398 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-207ENST00000612273 SPSB3Q6PJ21 355 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 MKXQ8IYA7 352 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 TCTEX1D2Q8WW35 142 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 INTS12Q96CB8 462 aaKnown RBP12.04□□□□□ -0.48
COL6A1-207ENST00000612273 C10orf35Q96D05 121 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 RNF122Q9H9V4 155 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 RNF150Q9ULK6 438 aa12.04□□□□□ -0.48
COL6A1-207ENST00000612273 ZXDAP98168 799 aa12.03□□□□□ -0.48
COL6A1-207ENST00000612273 IL11RAQ14626 422 aa12.03□□□□□ -0.48
COL6A1-207ENST00000612273 ALKBH2Q6NS38 261 aa12.03□□□□□ -0.48
COL6A1-207ENST00000612273 FOXL2NBQ6ZUU3 175 aa12.03□□□□□ -0.48
COL6A1-207ENST00000612273 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.03□□□□□ -0.48
COL6A1-207ENST00000612273 TMEM105Q8N8V8 129 aa12.03□□□□□ -0.48
COL6A1-207ENST00000612273 PSMF1Q92530 271 aa12.03□□□□□ -0.48
COL6A1-207ENST00000612273 THOC3Q96J01 351 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms