RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 EDDM3BP56851 147 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 ZNF816Q0VGE8 651 aaPredicted RBP7.51□□□□□ -1.21
LIG4-204ENST00000611712 FABP9Q0Z7S8 132 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 USF2Q15853 346 aaPredicted RBP7.51□□□□□ -1.21
LIG4-204ENST00000611712 PDZD11Q5EBL8 140 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 DHRS11Q6UWP2 260 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 OR5A2Q8NGI9 324 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 ADGRG7Q96K78 797 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 RRP8O43159 456 aaKnown RBP7.51□□□□□ -1.21
LIG4-204ENST00000611712 MT-CO3P00414 261 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 SUPT4H1P63272 117 aaKnown RBP7.51□□□□□ -1.21
LIG4-204ENST00000611712 RPL19P84098 196 aaKnown RBP7.51□□□□□ -1.21
LIG4-204ENST00000611712 SRSF3P84103 164 aaKnown RBP7.51□□□□□ -1.21
LIG4-204ENST00000611712 FOXO1Q12778 655 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 CXorf66Q5JRM2 361 aaPredicted RBP7.51□□□□□ -1.21
LIG4-204ENST00000611712 WDFY1Q8IWB7 410 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 TVP23CQ96ET8 276 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 PNRC2Q9NPJ4 139 aaKnown RBP7.51□□□□□ -1.21
LIG4-204ENST00000611712 TP53TG5Q9Y2B4 290 aa7.51□□□□□ -1.21
LIG4-204ENST00000611712 ZNF98A6NK75 572 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 NGFP01138 241 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 FGF12P61328 243 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 MZT1Q08AG7 82 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 PPP1R32Q7Z5V6 425 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 TMEM252Q8N6L7 170 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 GALMQ96C23 342 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 RSRP1Q9BUV0 290 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 TMEM222Q9H0R3 208 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 HEYLQ9NQ87 328 aaPredicted RBP7.5□□□□□ -1.21
LIG4-204ENST00000611712 LOC102723996A0A087X1L8 192 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 A0A1W2PPE2 198 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 F8VVB4 439 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 F8VWA3 439 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 CYB5BO43169 146 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 LYZL6O75951 148 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 CSRP1P21291 193 aaKnown RBP7.5□□□□□ -1.21
LIG4-204ENST00000611712 TAS2R30P59541 319 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 RPS16P62249 146 aaKnown RBP7.5□□□□□ -1.21
LIG4-204ENST00000611712 RPP30P78346 268 aaKnown RBP7.5□□□□□ -1.21
LIG4-204ENST00000611712 RUNX1Q01196 453 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 CEACAM21Q3KPI0 293 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 DCAF10Q5QP82 559 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 SSX9Q7RTT3 188 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 OR10P1Q8NGE3 313 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 FRZBQ92765 325 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 RPUSD4Q96CM3 377 aaKnown RBP7.5□□□□□ -1.21
LIG4-204ENST00000611712 PLPPR2Q96GM1 343 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 TAAR3PQ9P1P4 343 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 SPTA1P02549 2419 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 WDR87Q6ZQQ6 2873 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 UBE2L5PA0A1B0GUS4 154 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 SYNGR1O43759 233 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 SELEP16581 610 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 MEOX2P50222 304 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 SULT1A1P50225 295 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 IL24Q13007 206 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 C4orf17Q53FE4 359 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 CALHM1Q8IU99 346 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 Q8IYB0 196 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 C1orf87Q8N0U7 546 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 OR4A16Q8NH70 328 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 HES7Q9BYE0 225 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 SH3BGRL3Q9H299 93 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 OR2W1Q9Y3N9 320 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 THADAQ6YHU6 1953 aa7.5□□□□□ -1.21
LIG4-204ENST00000611712 hCG_38984A0A1B0GV85 526 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 C17orf112F2Z3M2 114 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 CDIPTO14735 213 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 HMGB3O15347 200 aaKnown RBP7.49□□□□□ -1.21
LIG4-204ENST00000611712 RAB31Q13636 194 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 ZNF766Q5HY98 468 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 MOB1BQ7L9L4 216 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 LHFPL1Q86WI0 220 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 ZIC4Q8N9L1 334 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 RFESDQ8TAC1 157 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 MALSU1Q96EH3 234 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 TP53RKQ96S44 253 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 TTTY12Q9BZ98 90 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 TMEM100Q9NV29 134 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 CACFD1Q9UGQ2 172 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 TMEM265A0A087WTH1 108 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 FGF16O43320 207 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 SYNGR2O43760 224 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 KLF7O75840 302 aaPredicted RBP7.49□□□□□ -1.21
LIG4-204ENST00000611712 IRF2P14316 349 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 HOXA1P49639 335 aaPredicted RBP7.49□□□□□ -1.21
LIG4-204ENST00000611712 PMP22Q01453 160 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 SLC16A13Q7RTY0 426 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 TMPRSS7Q7RTY8 843 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 MRGPRFQ96AM1 343 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 SMIM7Q9BQ49 75 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 CABLES2Q9BTV7 478 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 GAB2Q9UQC2 676 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 CYTIPO60759 359 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 PPP1CCP36873 323 aaKnown RBP7.49□□□□□ -1.21
LIG4-204ENST00000611712 FGF8P55075 233 aaPredicted RBP7.49□□□□□ -1.21
LIG4-204ENST00000611712 PPP1CBP62140 327 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 TLE1Q04724 770 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 TMEM251Q8N6I4 163 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 MUCL1Q96DR8 90 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms