RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 ZNF66Q6ZN08 573 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 NPAS1Q99742 590 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 IFT22Q9H7X7 185 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 SYNGR2O43760 224 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 TMEM183BQ1AE95 376 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 SLC2A8Q9NY64 477 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 A0A0J9YW62 118 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 HLA-DRB3P79483 266 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 PDPNQ86YL7 162 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 TMEM251Q8N6I4 163 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 OR5A2Q8NGI9 324 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 FBXL17Q9UF56 701 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 DLEC1Q9Y238 1755 aa13.69□□□□□ -0.22
TNXB-208ENST00000611016 A0A1W2PPC1 479 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 CDS2O95674 445 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 COX6B1P14854 86 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 EIF4EBP2Q13542 120 aaPredicted RBP13.68□□□□□ -0.22
TNXB-208ENST00000611016 ANKRD55Q3KP44 614 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 TSPO2Q5TGU0 170 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 GDF15Q99988 308 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 NPTNQ9Y639 398 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 TGIF1Q15583 401 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 EIF4E3Q8N5X7 224 aaKnown RBP13.68□□□□□ -0.22
TNXB-208ENST00000611016 OR1B1Q8NGR6 318 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 OR2J1Q9GZK6 312 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 INSIG2Q9Y5U4 225 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 FOCADQ5VW36 1801 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 F5H697 171 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 DHRS7BQ6IAN0 325 aaPredicted RBP13.68□□□□□ -0.22
TNXB-208ENST00000611016 OR4A4PQ8NGN8 299 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 OR5R1Q8NH85 324 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 SLC7A10Q9NS82 523 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 GAMTQ14353 236 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 TGIF2LYQ8IUE0 185 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 TGIF2LXQ8IUE1 241 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 RNF133Q8WVZ7 376 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 KNTC1P50748 2209 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 QSER1Q2KHR3 1735 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 SCN3AQ9NY46 2000 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 TRBV5-3A0A0A0MS03 114 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 CENPVL1A0A0U1RR11 272 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 DEDDO75618 318 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 UPK3AO75631 287 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 PARD6AQ9NPB6 346 aa13.68□□□□□ -0.22
TNXB-208ENST00000611016 IGKV1-8A0A0C4DH67 115 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 FGF5P12034 268 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 HTR1DP28221 377 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 ZNF154Q13106 437 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 C8orf82Q6P1X6 216 aaPredicted RBP13.67□□□□□ -0.22
TNXB-208ENST00000611016 PCGF1Q9BSM1 259 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 ANGPTL4Q9BY76 406 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 MRPS18AQ9NVS2 196 aaKnown RBP13.67□□□□□ -0.22
TNXB-208ENST00000611016 SPAG17Q6Q759 2223 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 ZP4Q12836 540 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 SLC25A42Q86VD7 318 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 GGTLC2Q14390 218 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 PIGYQ3MUY2 71 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 TMUB1Q9BVT8 246 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 A0A1B0GU03 582 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 USF1P22415 310 aaPredicted RBP13.67□□□□□ -0.22
TNXB-208ENST00000611016 GPR6P46095 362 aaPredicted RBP13.67□□□□□ -0.22
TNXB-208ENST00000611016 ABHD14AQ9BUJ0 271 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 PIPOXQ9P0Z9 390 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 PRF1P14222 555 aa13.67□□□□□ -0.22
TNXB-208ENST00000611016 ACAA2P42765 397 aaKnown RBP13.67□□□□□ -0.22
TNXB-208ENST00000611016 NXF2Q9GZY0 626 aaKnown RBP13.67□□□□□ -0.22
TNXB-208ENST00000611016 TRAV39A0A0B4J263 110 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 FAM210BQ96KR6 192 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 RBFOX3A6NFN3 312 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 ACP1P24666 158 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 RNASEKQ6P5S7 137 aaKnown RBP13.66□□□□□ -0.22
TNXB-208ENST00000611016 C10orf111Q8N326 155 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 PILRAQ9UKJ1 303 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 PPIAL4EA0A075B759 164 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 PPIAL4DF5H284 164 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 PPIAL4FP0DN26 164 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 IL11P20809 199 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 CCL8P80075 99 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 INPP5JQ15735 1006 aaPredicted RBP13.66□□□□□ -0.22
TNXB-208ENST00000611016 CLEC9AQ6UXN8 241 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 PRSS3P2Q8NHM4 247 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 CBY1Q9Y3M2 126 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 PPIAL4AQ9Y536 164 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 CASP8AP2Q9UKL3 1982 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 PDE6DO43924 150 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 PMCHP20382 165 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 GCSHP23434 173 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 UBE2L3P68036 154 aaKnown RBP13.66□□□□□ -0.22
TNXB-208ENST00000611016 ADAMTS17Q8TE56 1095 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 CHST5Q9GZS9 411 aa13.66□□□□□ -0.22
TNXB-208ENST00000611016 IGSF23A1L1A6 192 aa13.65□□□□□ -0.22
TNXB-208ENST00000611016 GNG7O60262 68 aa13.65□□□□□ -0.22
TNXB-208ENST00000611016 MMP16P51512 607 aa13.65□□□□□ -0.22
TNXB-208ENST00000611016 AESQ08117 197 aa13.65□□□□□ -0.22
TNXB-208ENST00000611016 TMEM88Q6PEY1 159 aa13.65□□□□□ -0.22
TNXB-208ENST00000611016 FAM214BQ7L5A3 538 aa13.65□□□□□ -0.22
TNXB-208ENST00000611016 SIRT7Q9NRC8 400 aa13.65□□□□□ -0.22
TNXB-208ENST00000611016 PRR13Q9NZ81 148 aa13.65□□□□□ -0.22
TNXB-208ENST00000611016 SLC25A10Q9UBX3 287 aaPredicted RBP13.65□□□□□ -0.22
TNXB-208ENST00000611016 FCN1O00602 326 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms