RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 UNC80Q8N2C7 3258 aa10.31□□□□□ -0.76
CTCFL-217ENST00000608425 KIAA1549Q9HCM3 1950 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 OR5B21A6NL26 309 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 DIRC3C9JPN6 131 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 CORTO00230 105 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 BMP5P22003 454 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 HNRNPA2B1P22626 353 aaKnown RBP10.3□□□□□ -0.76
CTCFL-217ENST00000608425 CSNK1A1P48729 337 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 CTXN1P60606 82 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 RPS15AP62244 130 aaKnown RBP10.3□□□□□ -0.76
CTCFL-217ENST00000608425 MRPS34P82930 218 aaKnown RBP10.3□□□□□ -0.76
CTCFL-217ENST00000608425 ARFRP1Q13795 201 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 FAM78BQ5VT40 261 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 LYPD6Q86Y78 171 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 OR2M3Q8NG83 312 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 OR5C1Q8NGR4 320 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 OR1E3Q8WZA6 343 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 PARLQ9H300 379 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 B3GALT1Q9Y5Z6 326 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 SHANK1Q9Y566 2161 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 CLEC18AA5D8T8 446 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 K7ERU9 68 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 DBIP07108 87 aaKnown RBP10.3□□□□□ -0.76
CTCFL-217ENST00000608425 SNU13P55769 128 aaKnown RBP10.3□□□□□ -0.76
CTCFL-217ENST00000608425 FAM53BQ14153 422 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 C1orf174Q8IYL3 243 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 CLEC18CQ8NCF0 446 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 RBMXL1Q96E39 390 aaKnown RBP10.3□□□□□ -0.76
CTCFL-217ENST00000608425 A0A1W2PR80 420 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 GAGE12BA1L429 117 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 ARPC3O15145 178 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 SNIP1Q8TAD8 396 aaKnown RBP10.3□□□□□ -0.76
CTCFL-217ENST00000608425 MKKSQ9NPJ1 570 aaPredicted RBP10.3□□□□□ -0.76
CTCFL-217ENST00000608425 EMC9Q9Y3B6 208 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 CEP290O15078 2479 aa10.3□□□□□ -0.76
CTCFL-217ENST00000608425 SPTBN5Q9NRC6 3674 aaKnown RBP10.29□□□□□ -0.76
CTCFL-217ENST00000608425 LOC107986453A0A1B0GWG9 222 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 SHISA7A6NL88 538 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 P2RY10O00398 339 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 SYNGR4O95473 234 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 SEMA4FO95754 770 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 CSTAP01040 98 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 DYNLT3P51808 116 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 TPPP2P59282 170 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 YPEL5P62699 121 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 RHOGP84095 191 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 KIR2DS3Q14952 304 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 FAM89BQ8N5H3 189 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 CISD2Q8N5K1 135 aaKnown RBP10.29□□□□□ -0.76
CTCFL-217ENST00000608425 OR5AU1Q8NGC0 362 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 NT5CQ8TCD5 201 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 EMG1Q92979 244 aaKnown RBP10.29□□□□□ -0.76
CTCFL-217ENST00000608425 OR51I2Q9H344 312 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 C10orf142B7Z368 130 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 CPMP14384 443 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 APOBEC3AP31941 199 aaPredicted RBP10.29□□□□□ -0.76
CTCFL-217ENST00000608425 UBE2NP61088 152 aaKnown RBP10.29□□□□□ -0.76
CTCFL-217ENST00000608425 ZNF726P1Q15940 193 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 TMEM95Q3KNT9 176 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 KIAA1644Q3SXP7 199 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 NIT1Q86X76 327 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 SULF2Q8IWU5 870 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 LGI3Q8N145 548 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 OR2C3Q8N628 320 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 OR4B1Q8NGF8 309 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 OR1N2Q8NGR9 330 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 ZNF519Q8TB69 540 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 CTHRC1Q96CG8 243 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 BMFQ96LC9 184 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 CISD1Q9NZ45 108 aaKnown RBP10.29□□□□□ -0.76
CTCFL-217ENST00000608425 ZNF780BQ9Y6R6 833 aa10.29□□□□□ -0.76
CTCFL-217ENST00000608425 PROB1E7EW31 1015 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 EML2O95834 649 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 CTSSP25774 331 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 BLKP51451 505 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 C1orf140Q5VVS0 124 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 ZNF787Q6DD87 383 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 VN1R4Q7Z5H5 301 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 STXBP6Q8NFX7 210 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 OR8G5Q8NG78 346 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 OR10G4Q8NGN3 311 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 OTOSQ8NHW6 89 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 UHRF2Q96PU4 802 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 SAMD10Q9BYL1 202 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 RTN4RQ9BZR6 473 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 LIME1Q9H400 295 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 LYRM2Q9NU23 88 aaPredicted RBP10.28□□□□□ -0.76
CTCFL-217ENST00000608425 SOHLH2Q9NX45 425 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 NAT8Q9UHE5 227 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 HMGB3O15347 200 aaKnown RBP10.28□□□□□ -0.76
CTCFL-217ENST00000608425 ST8SIA3O43173 380 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 CT45A8P0DMV1 189 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 CT45A9P0DMV2 189 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 SFTPDP35247 375 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 POU3F1Q03052 451 aaPredicted RBP10.28□□□□□ -0.76
CTCFL-217ENST00000608425 EXT1Q16394 746 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 HLA-BQ31612 363 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 CT45A2Q5DJT8 189 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 ODF3L1Q8IXM7 274 aa10.28□□□□□ -0.76
CTCFL-217ENST00000608425 SMRP1Q8NCR6 262 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms