RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	ZDHHC8	Q9ULC8	765 aa		13.24	□□□□□ -0.29
CELF4-223	ENST00000603232	SLC7A11	Q9UPY5	501 aa		13.24	□□□□□ -0.29
CELF4-223	ENST00000603232	S100A9	P06702	114 aa	Known RBP	13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	ZNF32	P17041	273 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	RND3	P61587	244 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	FABP9	Q0Z7S8	132 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	MALL	Q13021	153 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	RHEB	Q15382	184 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	SP6	Q3SY56	376 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	FAM209B	Q5JX69	171 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	ABLIM2	Q6H8Q1	611 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	ZADH2	Q8N4Q0	377 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	EDARADD	Q8WWZ3	215 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	TCEAL7	Q9BRU2	100 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	PBDC1	Q9BVG4	233 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	CRLF2	Q9HC73	371 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	TINAG	Q9UJW2	476 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	ST3GAL6	Q9Y274	331 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	DUXB	A0A1W2PPF3	345 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232		A0A1W2PPH5	198 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	PPIH	O43447	177 aa	Known RBP	13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	XRCC2	O43543	280 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	SP1	P08047	785 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	FUT3	P21217	361 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	CAMLG	P49069	296 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	RBM11	P57052	281 aa	Known RBP	13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	PMP22	Q01453	160 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	ZNF766	Q5HY98	468 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	IGFL3	Q6UXB1	125 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	FBXL14	Q8N1E6	418 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	OR2H1	Q9GZK4	316 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	NIT2	Q9NQR4	276 aa		13.23	□□□□□ -0.29
CELF4-223	ENST00000603232	SMG1	Q96Q15	3661 aa	Known RBP	13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	IGHV2-70	P01814	119 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232		P04436	131 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	S100A6	P06703	90 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	SNRNP70	P08621	437 aa	Known RBP	13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	RAB1A	P62820	205 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	PSG4	Q00888	419 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	GNMT	Q14749	295 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	PIGY	Q3MUY2	71 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	GGN	Q86UU5	652 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	OR52M1	Q8NGK5	317 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	BOD1	Q96IK1	185 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	JSRP1	Q96MG2	331 aa	Predicted RBP	13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	TMEM56	Q96MV1	263 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	FOXB1	Q99853	325 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	HIPK2	Q9H2X6	1198 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	SPACA1	Q9HBV2	294 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	ZNF581	Q9P0T4	197 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	TMEM56-RWDD3	S4R434	201 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	SPTA1	P02549	2419 aa		13.22	□□□□□ -0.29
CELF4-223	ENST00000603232	CLEC18A	A5D8T8	446 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232		K7N7A8	449 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	NME2P1	O60361	137 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	S100P	P25815	95 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	NTF4	P34130	210 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	HTR5A	P47898	357 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	FXYD4	P59646	89 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	ZNF266	Q14584	549 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	C1QL4	Q86Z23	238 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	CLEC18C	Q8NCF0	446 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	OR1J1	Q8NGS3	322 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	ISOC2	Q96AB3	205 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	ADGRG7	Q96K78	797 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	SPIN2A	Q99865	258 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	SPIN2B	Q9BPZ2	258 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	C1QTNF5	Q9BXJ0	243 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	PRDM14	Q9GZV8	571 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	TMEM222	Q9H0R3	208 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	WNT5B	Q9H1J7	359 aa		13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	RCL1	Q9Y2P8	373 aa	Known RBP	13.21	□□□□□ -0.29
CELF4-223	ENST00000603232	RTTN	Q86VV8	2226 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	KALRN	O60229	2985 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	TRDC	B7Z8K6	153 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	UMAD1	C9J7I0	102 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	MPPED1	O15442	326 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	CLN5	O75503	358 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	DIRAS3	O95661	229 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	PPY	P01298	95 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	MMP9	P14780	707 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	DAO	P14920	347 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	CD46	P15529	392 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	CARD18	P57730	90 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	HERV-K104	P61576	105 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	PHLDA2	Q53GA4	152 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	AKIRIN2	Q53H80	203 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232		Q6ZPA2	131 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	COLCA1	Q6ZS62	124 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232		Q6ZS92	163 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	AAED1	Q7RTV5	226 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	SAXO1	Q8IYX7	474 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	PARP12	Q9H0J9	701 aa	Known RBP	13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	SLC35B3	Q9H1N7	401 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	MIOX	Q9UGB7	285 aa		13.21	□□□□□ -0.3
CELF4-223	ENST00000603232	C3orf85	A0A1B0GTC6	90 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms