RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 ZNRD1Q9P1U0 126 aa4.26□□□□□ -1.73
VRK3-226ENST00000602029 CKLFQ9UBR5 152 aa4.26□□□□□ -1.73
VRK3-226ENST00000602029 SLC25A10Q9UBX3 287 aaPredicted RBP4.26□□□□□ -1.73
VRK3-226ENST00000602029 STEAP1Q9UHE8 339 aa4.26□□□□□ -1.73
VRK3-226ENST00000602029 CYB5R1Q9UHQ9 305 aa4.26□□□□□ -1.73
VRK3-226ENST00000602029 KCNG2Q9UJ96 466 aa4.26□□□□□ -1.73
VRK3-226ENST00000602029 LAMP5Q9UJQ1 280 aa4.26□□□□□ -1.73
VRK3-226ENST00000602029 B9D1Q9UPM9 204 aa4.26□□□□□ -1.73
VRK3-226ENST00000602029 ARHGAP32A7KAX9 2087 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 A0A1B0GW55 424 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 hCG_1809904A0A1W2PP81 198 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 A0A1W2PPE2 198 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 A0A1W2PPH5 198 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 A0A1W2PR64 198 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 A0A1W2PRV1 198 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 ANKRD34BA5PLL1 514 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 LINC00862A6NCI5 91 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 ACOD1A6NK06 481 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 OR4C45A6NMZ5 311 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 HMSDA8MTL9 139 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 E9PI62 339 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 RNASEK-C17orf49H0YIS7 233 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 H3BUI4 141 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DCTN6O00399 190 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 CDIPTO14735 213 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 AKR7A2O43488 359 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 XRCC2O43543 280 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 CREBL2O60519 120 aaPredicted RBP4.25□□□□□ -1.73
VRK3-226ENST00000602029 TSPAN9O75954 239 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 NDUFB6O95139 128 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 ZFPL1O95159 310 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 FSTL3O95633 263 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 TFF1P04155 84 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 MRPL3P09001 348 aaKnown RBP4.25□□□□□ -1.73
VRK3-226ENST00000602029 UBCP0CG48 685 aaKnown RBP4.25□□□□□ -1.73
VRK3-226ENST00000602029 DUX4L2P0CJ85 424 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DUX4L3P0CJ86 424 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DUX4L4P0CJ87 422 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DUX4L5P0CJ88 424 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DUX4L6P0CJ89 424 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DUX4L7P0CJ90 424 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 SELLP14151 372 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 TBPP20226 339 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 ALOX5APP20292 161 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 RAB6AP20340 208 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 M6PRP20645 277 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 PAX6P26367 422 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 GDNFP39905 211 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 CX3CR1P49238 355 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 CAV3P56539 151 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 CD69Q07108 199 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 TP53I3Q53FA7 332 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 CLLU1Q5K131 121 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 VAX1Q5SQQ9 334 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 RAB12Q6IQ22 244 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 LPCAT3Q6P1A2 487 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 C11orf88Q6PI97 169 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DUX4L9Q6RFH8 374 aaPredicted RBP4.25□□□□□ -1.73
VRK3-226ENST00000602029 DRAM2Q6UX65 266 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 FAM57BQ71RH2 274 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 KRT74Q7RTS7 529 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 SSX6Q7RTT6 188 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DCXRQ7Z4W1 244 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.25□□□□□ -1.73
VRK3-226ENST00000602029 C9orf62Q8N4C0 152 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 GCSAMQ8N6F7 178 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DTX3Q8N9I9 347 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 CYB561A3Q8NBI2 242 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 PLPP7Q8NBV4 271 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 UXS1Q8NBZ7 420 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 CCDC54Q8NEL0 328 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 SLC26A10Q8NG04 563 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 OR6M1Q8NGM8 313 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 LGALS14Q8TCE9 139 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 CCDC107Q8WV48 283 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DPF1Q92782 380 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DACT3Q96B18 629 aaPredicted RBP4.25□□□□□ -1.73
VRK3-226ENST00000602029 PHF21AQ96BD5 680 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 SLAMF6Q96DU3 332 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 SLC25A38Q96DW6 304 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 SEH1LQ96EE3 360 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 REEP6Q96HR9 211 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 PGAM5Q96HS1 289 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 MAP6Q96JE9 813 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 FYTTD1Q96QD9 318 aaKnown RBP4.25□□□□□ -1.73
VRK3-226ENST00000602029 OR8B4Q96RC9 309 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 TBX5Q99593 518 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 SLC25A21Q9BQT8 299 aaPredicted RBP4.25□□□□□ -1.73
VRK3-226ENST00000602029 OR10A2Q9H208 303 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 PPIL3Q9H2H8 161 aaKnown RBP4.25□□□□□ -1.73
VRK3-226ENST00000602029 OPA3Q9H6K4 179 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 METTL8Q9H825 291 aaKnown RBP4.25□□□□□ -1.73
VRK3-226ENST00000602029 LIN7BQ9HAP6 207 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 MED9Q9NWA0 146 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 DUX4Q9UBX2 424 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 FBLN5Q9UBX5 448 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 MTFP1Q9UDX5 166 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 ELF5Q9UKW6 265 aaPredicted RBP4.25□□□□□ -1.73
VRK3-226ENST00000602029 TANC2Q9HCD6 1990 aa4.25□□□□□ -1.73
VRK3-226ENST00000602029 TENM2Q9NT68 2774 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms