RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 CST7O76096 145 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 TMEM50AO95807 157 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 C20orf204Q6ZNR8 217 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 TMEM252Q8N6L7 170 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 POM121Q96HA1 1249 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 SLC35B3Q9H1N7 401 aa17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 LYRM2Q9NU23 88 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 TNRC6AQ8NDV7 1962 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-225ENST00000600733 LILRA1O75019 489 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 PITX3O75364 302 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 TUSC2O75896 110 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 MAGEA5P43359 124 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 RND3P61587 244 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 CCL20P78556 96 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 ZNF266Q14584 549 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 NMSQ5H8A3 153 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 KRBOX4Q5JUW0 171 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 ODF3L1Q8IXM7 274 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 SAXO1Q8IYX7 474 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 TMEM217Q8N7C4 229 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 OR5C1Q8NGR4 320 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 APOBEC3DQ96AK3 386 aaPredicted RBP17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 SPIN2AQ99865 258 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 SPIN2BQ9BPZ2 258 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 FAM173AQ9BQD7 235 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 PBDC1Q9BVG4 233 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 PLEKHF2Q9H8W4 249 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 KCNJ16Q9NPI9 418 aa17.3■□□□□ 0.36
SHKBP1-225ENST00000600733 ESPL1Q14674 2120 aa17.29■□□□□ 0.36
SHKBP1-225ENST00000600733 C1orf196B1AJZ1 125 aa17.29■□□□□ 0.36
SHKBP1-225ENST00000600733 ARG1P05089 322 aa17.29■□□□□ 0.36
SHKBP1-225ENST00000600733 ACP1P24666 158 aa17.29■□□□□ 0.36
SHKBP1-225ENST00000600733 RAB1AP62820 205 aa17.29■□□□□ 0.36
SHKBP1-225ENST00000600733 VAMP2P63027 116 aa17.29■□□□□ 0.36
SHKBP1-225ENST00000600733 SRSF7Q16629 238 aaKnown RBP eCLIP17.29■□□□□ 0.36
SHKBP1-225ENST00000600733 ATP23Q9Y6H3 246 aa17.29■□□□□ 0.36
SHKBP1-225ENST00000600733 EIF3GO75821 320 aaKnown RBP eCLIP17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 MT-ND4LP03901 98 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 UCP1P25874 307 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 ITGA3P26006 1051 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 C3AR1Q16581 482 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 MPV17LQ2QL34 196 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 MKXQ8IYA7 352 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 PLPPR1Q8TBJ4 325 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 OR51B6Q9H340 312 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 KIR2DS1A0A191URI9 304 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 hCG_1809904A0A1W2PP81 198 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 A0A1W2PR64 198 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 A0A1W2PRV1 198 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 HS3ST1O14792 307 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 EPHA1P21709 976 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 KIR2DS4P43632 304 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 MEOX2P50222 304 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 DYNLT3P51808 116 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 KIR2DS1Q14954 304 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 SUMF2Q8NBJ7 301 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 RDH5Q92781 318 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 RYDENQ9NUL5 291 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 PLA2G3Q9NZ20 509 aa17.28■□□□□ 0.36
SHKBP1-225ENST00000600733 CD300LBA8K4G0 201 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 LINC01387J3KSC0 135 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 SS18L1O75177 396 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 SYNGR4O95473 234 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 IFNA4P05014 189 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 VDAC1P21796 283 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 SULT1A1P50225 295 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 IGFBP7Q16270 282 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 ABHD17BQ5VST6 288 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 C17orf78Q8N4C9 275 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 LFNGQ8NES3 379 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 MRPL30Q8TCC3 161 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 POM121L2Q96KW2 1035 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 SLC25A31Q9H0C2 315 aa17.27■□□□□ 0.36
SHKBP1-225ENST00000600733 A0A1W2PPE2 198 aa17.27■□□□□ 0.35
SHKBP1-225ENST00000600733 CBR1P16152 277 aa17.27■□□□□ 0.35
SHKBP1-225ENST00000600733 RUNX1Q01196 453 aa17.27■□□□□ 0.35
SHKBP1-225ENST00000600733 PCSK4Q6UW60 755 aa17.27■□□□□ 0.35
SHKBP1-225ENST00000600733 CMTM1Q8IZ96 169 aa17.27■□□□□ 0.35
SHKBP1-225ENST00000600733 FAM24BQ8N5W8 94 aa17.27■□□□□ 0.35
SHKBP1-225ENST00000600733 KDF1Q8NAX2 398 aaPredicted RBP17.27■□□□□ 0.35
SHKBP1-225ENST00000600733 APH1AQ96BI3 265 aa17.27■□□□□ 0.35
SHKBP1-225ENST00000600733 HIST1H2AAQ96QV6 131 aa17.27■□□□□ 0.35
SHKBP1-225ENST00000600733 TTTY12Q9BZ98 90 aa17.27■□□□□ 0.35
SHKBP1-225ENST00000600733 B4GALT7Q9UBV7 327 aa17.27■□□□□ 0.35
SHKBP1-225ENST00000600733 A0A1W2PPE3 182 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 CLEC18AA5D8T8 446 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 C9orf172C9J069 976 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 CHST1O43916 411 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 PGLYRP1O75594 196 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 JMJD7P0C870 316 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 ID3Q02535 119 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 RNF212Q495C1 297 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 SPSB3Q6PJ21 355 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 CLEC18CQ8NCF0 446 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 OR5A2Q8NGI9 324 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 TUBA4BQ9H853 241 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 FOXJ2Q9P0K8 574 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 PUS1Q9Y606 427 aaKnown RBP eCLIP17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 MED13Q9UHV7 2174 aa17.26■□□□□ 0.35
SHKBP1-225ENST00000600733 KMT2EQ8IZD2 1858 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms