RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 IGKV1D-13A0A0B4J2D9 117 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 SOX15O60248 233 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 PITX3O75364 302 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 NRASP01111 189 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 IGKV1-13P0DP09 117 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 IL36RNQ9UBH0 155 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 A0A1W2PQM1 296 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 MAS1LP35410 378 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 CLN3Q13286 438 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 CALHM1Q8IU99 346 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 OR2M3Q8NG83 312 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 PTGDSP41222 190 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 RPS16P62249 146 aaKnown RBP15.8■□□□□ 0.12
UPF1-210ENST00000600689 TLE4Q04727 773 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 TESK1Q15569 626 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 ZNF124Q15973 351 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 KIAA2026Q5HYC2 2103 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 ZNF787Q6DD87 383 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 ODF3L1Q8IXM7 274 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 HS3ST6Q96QI5 342 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 BCO1Q9HAY6 547 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 RPRMQ9NS64 109 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 LYRM2Q9NU23 88 aaPredicted RBP15.8■□□□□ 0.12
UPF1-210ENST00000600689 DECR2Q9NUI1 292 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 LAMP3Q9UQV4 416 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 FRYQ5TBA9 3013 aa15.8■□□□□ 0.12
UPF1-210ENST00000600689 ZNF16P17020 682 aaPredicted RBP15.79■□□□□ 0.12
UPF1-210ENST00000600689 RTP5Q14D33 572 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 ZNF506Q5JVG8 444 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 C9orf135Q5VTT2 229 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 PRR18Q8N4B5 295 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 TMEM37Q8WXS4 190 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 RPUSD4Q96CM3 377 aaKnown RBP15.79■□□□□ 0.12
UPF1-210ENST00000600689 TMEM222Q9H0R3 208 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 PRDM6Q9NQX0 595 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 MYOTQ9UBF9 498 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 SIT1Q9Y3P8 196 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 A0A0U1RQV5 110 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 AQP7P3A6NL99 342 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 CLDN34H7C241 214 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 HSPB1P04792 205 aaKnown RBP15.79■□□□□ 0.12
UPF1-210ENST00000600689 SELENOHQ8IZQ5 122 aaKnown RBP15.79■□□□□ 0.12
UPF1-210ENST00000600689 CARFQ8N187 725 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 OR1K1Q8NGR3 316 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 DEFB126Q9BYW3 111 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 TRAV39A0A0B4J263 110 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 METTL15P1P0C7V9 234 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 OR8G1Q15617 311 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 RHBDD2Q6NTF9 364 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 SSX7Q7RTT5 188 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 CLDN23Q96B33 292 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 PLK3Q9H4B4 646 aa15.79■□□□□ 0.12
UPF1-210ENST00000600689 EML6Q6ZMW3 1958 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 IFNA10P01566 189 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 TCN2P20062 427 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 BMP5P22003 454 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 CCL7P80098 99 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 P2RY6Q15077 328 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 NFAM1Q8NET5 270 aaPredicted RBP15.78■□□□□ 0.12
UPF1-210ENST00000600689 A0A0G2JRQ6 117 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 TNFSF11O14788 317 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 DTYMKP23919 212 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 SUMO3P55854 103 aaPredicted RBP15.78■□□□□ 0.12
UPF1-210ENST00000600689 PRSS8Q16651 343 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 NABP1Q96AH0 204 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 GPR87Q9BY21 358 aa15.78■□□□□ 0.12
UPF1-210ENST00000600689 LY6G6EA0A0G2JKS1 128 aa15.77■□□□□ 0.12
UPF1-210ENST00000600689 IFNA5P01569 189 aa15.77■□□□□ 0.12
UPF1-210ENST00000600689 FAM90A2PQ658T7 463 aa15.77■□□□□ 0.12
UPF1-210ENST00000600689 LRTM2Q8N967 370 aa15.77■□□□□ 0.12
UPF1-210ENST00000600689 OR4X1Q8NH49 305 aa15.77■□□□□ 0.12
UPF1-210ENST00000600689 IL1F10Q8WWZ1 152 aa15.77■□□□□ 0.12
UPF1-210ENST00000600689 AURKAIP1Q9NWT8 199 aaPredicted RBP15.77■□□□□ 0.12
UPF1-210ENST00000600689 U3KQA8 63 aa15.77■□□□□ 0.12
UPF1-210ENST00000600689 PDCD6O75340 191 aa15.77■□□□□ 0.11
UPF1-210ENST00000600689 SCRG1O75711 98 aa15.77■□□□□ 0.11
UPF1-210ENST00000600689 CCL2P13500 99 aa15.77■□□□□ 0.11
UPF1-210ENST00000600689 TAS2R60P59551 318 aa15.77■□□□□ 0.11
UPF1-210ENST00000600689 COL10A1Q03692 680 aa15.77■□□□□ 0.11
UPF1-210ENST00000600689 ZNF664Q8N3J9 261 aa15.77■□□□□ 0.11
UPF1-210ENST00000600689 EXTL1Q92935 676 aa15.77■□□□□ 0.11
UPF1-210ENST00000600689 IER2Q9BTL4 223 aa15.77■□□□□ 0.11
UPF1-210ENST00000600689 ANGPTL4Q9BY76 406 aa15.77■□□□□ 0.11
UPF1-210ENST00000600689 A0A087WWC5 75 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 LOC102723971A0A1B0GUV8 181 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 CNOT4O95628 575 aaKnown RBP15.76■□□□□ 0.11
UPF1-210ENST00000600689 ZNF32P17041 273 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 ZNF92Q03936 586 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 CNN3Q15417 329 aaKnown RBP15.76■□□□□ 0.11
UPF1-210ENST00000600689 KMT5CQ86Y97 462 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 GNPNAT1Q96EK6 184 aaPredicted RBP15.76■□□□□ 0.11
UPF1-210ENST00000600689 RASL10BQ96S79 203 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 CHD3Q12873 2000 aaKnown RBP15.76■□□□□ 0.11
UPF1-210ENST00000600689 ELOA3CA0A087WX78 387 aaPredicted RBP15.76■□□□□ 0.11
UPF1-210ENST00000600689 A0A1W2PPQ1 181 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 TCAPO15273 167 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 IDH3GP51553 393 aaPredicted RBP15.76■□□□□ 0.11
UPF1-210ENST00000600689 HIST3H3Q16695 136 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 SLC35E3Q7Z769 313 aa15.76■□□□□ 0.11
UPF1-210ENST00000600689 ZNF611Q8N823 705 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms