RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	ST8SIA4	Q92187	359 aa		18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	TMEM186	Q96B77	213 aa		18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	SHARPIN	Q9H0F6	387 aa		18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	ZAN	Q9Y493	2812 aa		18.18	■□□□□ 0.5
LTBP4-227	ENST00000600026	TRAV20	A0A0B4J274	112 aa		18.17	■□□□□ 0.5
LTBP4-227	ENST00000600026	GPR37	O15354	613 aa		18.17	■□□□□ 0.5
LTBP4-227	ENST00000600026	PTBP1	P26599	531 aa	Known RBP eCLIP	18.17	■□□□□ 0.5	1e-6	■■■■■ 35.4
LTBP4-227	ENST00000600026	ETV6	P41212	452 aa		18.17	■□□□□ 0.5
LTBP4-227	ENST00000600026	GNG2	P59768	71 aa		18.17	■□□□□ 0.5
LTBP4-227	ENST00000600026	HACD4	Q5VWC8	232 aa		18.17	■□□□□ 0.5
LTBP4-227	ENST00000600026	SNX29P2	Q8IUI4	249 aa		18.17	■□□□□ 0.5
LTBP4-227	ENST00000600026	CMSS1	Q9BQ75	279 aa	Known RBP	18.17	■□□□□ 0.5
LTBP4-227	ENST00000600026	AK3	Q9UIJ7	227 aa		18.17	■□□□□ 0.5
LTBP4-227	ENST00000600026	TMEM235	A6NFC5	223 aa		18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026	HLA-DQB1	P01920	261 aa		18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026	MELTF	P08582	738 aa		18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026	KRBOX4	Q5JUW0	171 aa		18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026		Q71RC1	249 aa	Predicted RBP	18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026	RTN4RL2	Q86UN3	420 aa		18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026	PLPPR1	Q8TBJ4	325 aa		18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026	RIMS4	Q9H426	269 aa	Predicted RBP	18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026	CHMP1A	Q9HD42	196 aa	Predicted RBP	18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026	YAE1D1	Q9NRH1	226 aa		18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026	HIF1AN	Q9NWT6	349 aa		18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026	KCNS2	Q9ULS6	477 aa		18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026	KCNK7	Q9Y2U2	307 aa		18.16	■□□□□ 0.5
LTBP4-227	ENST00000600026		A0A0G2JMP0	313 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026		A0A0X1KG70	313 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	TMEM30CP	A0ZSE6	113 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	C22orf46	C9J442	243 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	ERP29	P30040	261 aa	Known RBP	18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	PRSS3	P35030	304 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	EDDM3B	P56851	147 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	MRPS10	P82664	201 aa	Known RBP	18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	ZNF45	Q02386	682 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	AES	Q08117	197 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	EDDM3A	Q14507	147 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	OLFML2A	Q68BL7	652 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	SLC35E4	Q6ICL7	350 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	OR4M2	Q8NGB6	313 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	SOST	Q9BQB4	213 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	MMP26	Q9NRE1	261 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	ING3	Q9NXR8	418 aa		18.15	■□□□□ 0.5
LTBP4-227	ENST00000600026	CSPG4	Q6UVK1	2322 aa		18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	LOC105371242	A0A075B767	164 aa		18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	PPIAL4C	A0A0B4J2A2	164 aa		18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	P2RX3	P56373	397 aa		18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	PAX5	Q02548	391 aa		18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	PAX2	Q02962	417 aa		18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	RSBN1	Q5VWQ0	802 aa	Predicted RBP	18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	ZNF497	Q6ZNH5	498 aa		18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	BTN2A1	Q7KYR7	527 aa		18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	H1FX	Q92522	213 aa	Known RBP	18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	DYRK2	Q92630	601 aa		18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	C12orf4	Q9NQ89	552 aa		18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026		V9GYH0	126 aa		18.14	■□□□□ 0.49
LTBP4-227	ENST00000600026	IGHV2-70D	A0A0C4DH43	119 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026		A8MV72	311 aa	Predicted RBP	18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	SULT1C2	O00338	296 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	ECD	O95905	644 aa	Predicted RBP	18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	C11orf91	Q3C1V1	193 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	PYDC2	Q56P42	97 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	CD276	Q5ZPR3	534 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	DACT3	Q96B18	629 aa	Predicted RBP	18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	COQ2	Q96H96	371 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	ABHD1	Q96SE0	405 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	NCOR1P1	Q9H4R4	102 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	SCPEP1	Q9HB40	452 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	AKIP1	Q9NQ31	210 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	LPAR3	Q9UBY5	353 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	KIF25	Q9UIL4	384 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	ELF5	Q9UKW6	265 aa	Predicted RBP	18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	DSCAML1	Q8TD84	2053 aa		18.13	■□□□□ 0.49
LTBP4-227	ENST00000600026	MEIKIN	A0A087WXM9	373 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	POM121C	A8CG34	1229 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	CTDSPL	O15194	276 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	PTHLH	P12272	177 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	CBX5	P45973	191 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	GLIPR1	P48060	266 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	LSAMP	Q13449	338 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	DCAF12L2	Q5VW00	463 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	NUDCD2	Q8WVJ2	157 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	CYYR1	Q96J86	154 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	TSC22D3	Q99576	134 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	INSIG2	Q9Y5U4	225 aa		18.12	■□□□□ 0.49
LTBP4-227	ENST00000600026	TRBV23-1	A0A0A0MS06	115 aa		18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	ENSA	O43768	121 aa	Known RBP	18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	NAPSA	O96009	420 aa		18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	MT-ND4	P03905	459 aa		18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	MEF2C	Q06413	473 aa	Predicted RBP	18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	ZNF846	Q147U1	533 aa		18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	TRAPPC6B	Q86SZ2	158 aa		18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	GAPT	Q8N292	157 aa		18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	TPRX1	Q8N7U7	411 aa		18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	SETD6	Q8TBK2	473 aa		18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	MRPL30	Q8TCC3	161 aa	Known RBP	18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	FCAMR	Q8WWV6	532 aa		18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	HDHD3	Q9BSH5	251 aa	Predicted RBP	18.11	■□□□□ 0.49
LTBP4-227	ENST00000600026	DCTN5	Q9BTE1	182 aa		18.11	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms