RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 KNG1P01042 644 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 FSHBP01225 129 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 LHBP01229 141 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 MELTFP08582 738 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 FUT3P21217 361 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 GDNFP39905 211 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 UBA52P62987 128 aaKnown RBP10.51□□□□□ -0.73
UPF1-208ENST00000600012 ARFRP1Q13795 201 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 ZNF146Q15072 292 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 PNLIPRP3Q17RR3 467 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 SPIN3Q5JUX0 258 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 ZNF57Q68EA5 555 aaPredicted RBP10.51□□□□□ -0.73
UPF1-208ENST00000600012 SFRP4Q6FHJ7 346 aaPredicted RBP10.51□□□□□ -0.73
UPF1-208ENST00000600012 TRAPPC6BQ86SZ2 158 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 OR5T2Q8NGG2 359 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 GPX8Q8TED1 209 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 CCL17Q92583 94 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 HDHD3Q9BSH5 251 aaPredicted RBP10.51□□□□□ -0.73
UPF1-208ENST00000600012 FAAP24Q9BTP7 215 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 RASL12Q9NYN1 266 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 RCC2Q9P258 522 aaKnown RBP10.51□□□□□ -0.73
UPF1-208ENST00000600012 NLKQ9UBE8 527 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 DNAJB11Q9UBS4 358 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 KLK11Q9UBX7 282 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 HSF4Q9ULV5 492 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 NPTNQ9Y639 398 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 DSCAML1Q8TD84 2053 aa10.51□□□□□ -0.73
UPF1-208ENST00000600012 PPIAL4EA0A075B759 164 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 TRAV24A0A0B4J272 114 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 PPIAL4CA0A0B4J2A2 164 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 RFPL4AA6NLU0 287 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 LRRC30A6NM36 301 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 PPIAL4DF5H284 164 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 RFPL4AL1F8VTS6 287 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 SH2D1BO14796 132 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 ORC5O43913 435 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 FOXH1O75593 365 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 LPLP06858 475 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 PPIAL4FP0DN26 164 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 PSG2P11465 335 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 INPP1P49441 399 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 LCN2P80188 198 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 FOXL1Q12952 345 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 PAN3Q58A45 887 aaKnown RBP10.5□□□□□ -0.73
UPF1-208ENST00000600012 HACD4Q5VWC8 232 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 SUMF2Q8NBJ7 301 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 NEK7Q8TDX7 302 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 SCPEP1Q9HB40 452 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 TMEM106BQ9NUM4 274 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 OPN4Q9UHM6 478 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 TBC1D24Q9ULP9 559 aa10.5□□□□□ -0.73
UPF1-208ENST00000600012 KIAA2026Q5HYC2 2103 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 IGKV1D-17A0A075B6S4 117 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 OOEPA6NGQ2 149 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 OR2AT4A6NND4 320 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 SERPINE3A8MV23 424 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 TMEM178BH3BS89 294 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 SULT1C2O00338 296 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 SLC33A1O00400 549 aaPredicted RBP10.49□□□□□ -0.73
UPF1-208ENST00000600012 ARL6IP1Q15041 203 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 PRR31Q5SQ13 230 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 SHISA2Q6UWI4 295 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 RBMS3Q6XE24 437 aaKnown RBP10.49□□□□□ -0.73
UPF1-208ENST00000600012 FAM90A1Q86YD7 464 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 CD177Q8N6Q3 437 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 GVQW1Q8N7I0 195 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 DEFB108BQ8NET1 73 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 C22orf15Q8WYQ4 148 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 MAFIPQ8WZ33 124 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 CMSS1Q9BQ75 279 aaKnown RBP10.49□□□□□ -0.73
UPF1-208ENST00000600012 ZNF747Q9BV97 191 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 DPCDQ9BVM2 203 aaPredicted RBP10.49□□□□□ -0.73
UPF1-208ENST00000600012 PPA2Q9H2U2 334 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 IFT22Q9H7X7 185 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 SPACA1Q9HBV2 294 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 MTFP1Q9UDX5 166 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 GLS2Q9UI32 602 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 ZNF222Q9UK12 451 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 RBMX2Q9Y388 322 aaKnown RBP10.49□□□□□ -0.73
UPF1-208ENST00000600012 PPIAL4AQ9Y536 164 aa10.49□□□□□ -0.73
UPF1-208ENST00000600012 TMEM82A0PJX8 343 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 MCRIP1C9JLW8 97 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 CA11O75493 328 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 RBBP9O75884 186 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 GYPAP02724 150 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 HKR1P10072 659 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 PRDX2P32119 198 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 RCVRNP35243 200 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 GABRA2P47869 451 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 COL10A1Q03692 680 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 KLF9Q13886 244 aaPredicted RBP10.48□□□□□ -0.73
UPF1-208ENST00000600012 ATXN7L3Q14CW9 347 aaPredicted RBP10.48□□□□□ -0.73
UPF1-208ENST00000600012 TUSC1Q2TAM9 212 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 STUMQ69YW2 141 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 C1orf87Q8N0U7 546 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 TOMM5Q8N4H5 51 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 SPICQ8N5J4 248 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 POC5Q8NA72 575 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 PLPPR1Q8TBJ4 325 aa10.48□□□□□ -0.73
UPF1-208ENST00000600012 CHST6Q9GZX3 395 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms