RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 BAXQ07812 192 aa16.66■□□□□ 0.26
ARHGEF1-218ENST00000599589 ZNF501Q96CX3 271 aaPredicted RBP16.66■□□□□ 0.26
ARHGEF1-218ENST00000599589 TMEM68Q96MH6 324 aa16.66■□□□□ 0.26
ARHGEF1-218ENST00000599589 TMEM56Q96MV1 263 aa16.66■□□□□ 0.26
ARHGEF1-218ENST00000599589 GAB2Q9UQC2 676 aa16.66■□□□□ 0.26
ARHGEF1-218ENST00000599589 TMEM56-RWDD3S4R434 201 aa16.66■□□□□ 0.26
ARHGEF1-218ENST00000599589 CLN3Q13286 438 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 SHBQ15464 509 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 LCN15Q6UWW0 184 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 Q6ZSR3 168 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 SIGLEC12Q96PQ1 595 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 HIPK2Q9H2X6 1198 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 TRIOBPQ9H2D6 2365 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 TNRC18O15417 2968 aaPredicted RBP16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 IGKV1-12A0A0C4DH73 117 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 IGKV1D-12P01611 117 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 HLA-HP01893 362 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 FGF8P55075 233 aaPredicted RBP16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 WDR25Q64LD2 544 aaPredicted RBP16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 BEND2Q8NDZ0 799 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 C10orf35Q96D05 121 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 PLEK2Q9NYT0 353 aa16.65■□□□□ 0.26
ARHGEF1-218ENST00000599589 LAMA1P25391 3075 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 TRAV1-1A0A0B4J248 108 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 SLC25A53Q5H9E4 307 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 ZNF787Q6DD87 383 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 SLC25A24Q6NUK1 477 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 H1FOOQ8IZA3 346 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 OSR2Q8N2R0 312 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 PLPPR1Q8TBJ4 325 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 SPSB1Q96BD6 273 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 CDX2Q99626 313 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 SLC7A10Q9NS82 523 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 ST3GAL6Q9Y274 331 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 TLX3O43711 291 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 ID3Q02535 119 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 CYB5R2Q6BCY4 276 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 NECAP1Q8NC96 275 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 VSIRQ9H7M9 311 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 SRD5A3Q9H8P0 318 aa16.64■□□□□ 0.25
ARHGEF1-218ENST00000599589 XKRY2A2RUG3 117 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 H3BP45 60 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 OTX1P32242 354 aaPredicted RBP16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 SLC10A1Q14973 349 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 P2RY6Q15077 328 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 EXT1Q16394 746 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 ABLIM2Q6H8Q1 611 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 BORCS8Q96FH0 119 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 HIST1H2AAQ96QV6 131 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 RPRMQ9NS64 109 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 AQP7P3A6NL99 342 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 DFFBO76075 338 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 G0S2P27469 103 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 PAX9P55771 341 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 IL24Q13007 206 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 BATF2Q8N1L9 274 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 NABP1Q96AH0 204 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 RSG1Q9BU20 258 aa16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 RBM24Q9BX46 236 aaKnown RBP16.63■□□□□ 0.25
ARHGEF1-218ENST00000599589 CHD3Q12873 2000 aaKnown RBP16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 TOX3O15405 576 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 TUBG1P23258 451 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 ZNF818PQ6ZRF7 136 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 SSX7Q7RTT5 188 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 FAM185AQ8N0U4 392 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 ABHD14BQ96IU4 210 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 ZNF442Q9H7R0 627 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 METTL7AQ9H8H3 244 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 PTRH2Q9Y3E5 179 aaKnown RBP16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 UNC13CQ8NB66 2214 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 ASXL3Q9C0F0 2248 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 SDK1Q7Z5N4 2213 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 A0A1B0GWJ7 208 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 PTGDSP41222 190 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 TNFRSF9Q07011 255 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 MALLQ13021 153 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 NMSQ5H8A3 153 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 LYSMD4Q5XG99 296 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 OR10G3Q8NGC4 313 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 CTDSP1Q9GZU7 261 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 DCAF16Q9NXF7 216 aa16.62■□□□□ 0.25
ARHGEF1-218ENST00000599589 TMEM267Q0VDI3 215 aaPredicted RBP16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 CNN3Q15417 329 aaKnown RBP16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 ZNF726P1Q15940 193 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 UBALD2Q8IYN6 164 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 SPTSSAQ969W0 71 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 RBM14Q96PK6 669 aaKnown RBP16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 P4HTMQ9NXG6 502 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 LAMP3Q9UQV4 416 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 TRBV11-1A0A0K0K1C0 115 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 CEBPZOSA8MTT3 80 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 PDCD6O75340 191 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 GCGP01275 180 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 IFNA5P01569 189 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 MRPS34P82930 218 aaKnown RBP16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 ADIRFQ15847 76 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 FAM69BQ5VUD6 431 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 C16orf82Q7Z2V1 217 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 GAPTQ8N292 157 aa16.61■□□□□ 0.25
ARHGEF1-218ENST00000599589 DUSP23Q9BVJ7 150 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms