RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 KIR3DL2P43630 455 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 POU3F4P49335 361 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 GNB2P62879 340 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 CLVS2Q5SYC1 327 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 STEAP1BQ6NZ63 245 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 C11orf88Q6PI97 169 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 GSG1LQ6UXU4 331 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 DOK3Q7L591 496 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 HSD17B13Q7Z5P4 300 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-209ENST00000598895 PDZD9Q8IXQ8 264 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 PLPP7Q8NBV4 271 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 SCCPDHQ8NBX0 429 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 OR8B3Q8NGG8 313 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 OR6M1Q8NGM8 313 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 OR14K1Q8NGZ2 314 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 GPX8Q8TED1 209 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 GCDHQ92947 438 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-209ENST00000598895 PTX4Q96A99 478 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 FAM3DQ96BQ1 224 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 FOXRED1Q96CU9 486 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-209ENST00000598895 ORAI1Q96D31 301 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 NEIL1Q96FI4 390 aaPredicted RBP10.07□□□□□ -0.8
ZNF548-209ENST00000598895 OR8B2Q96RD0 313 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 TMEM138Q9NPI0 162 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 MIOXQ9UGB7 285 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 V9GYS6 101 aa10.07□□□□□ -0.8
ZNF548-209ENST00000598895 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.07□□□□□ -0.86e-11■■■■■ 33.7
ZNF548-209ENST00000598895 SONP18583 2426 aaKnown RBP10.06□□□□□ -0.8
ZNF548-209ENST00000598895 ANK3Q12955 4377 aaKnown RBP10.06□□□□□ -0.8
ZNF548-209ENST00000598895 TRAV8-7A0A075B6U6 113 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 TRAV18A0A075B6X5 111 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 LOC107986453A0A1B0GWG9 222 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 OOEPA6NGQ2 149 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 H3BUI4 141 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 GOSR2O14653 212 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 ARPC5O15511 151 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 ADAM20O43506 726 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 SYT7O43581 403 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 NRASP01111 189 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 TFF1P04155 84 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 VSIG10L2P0DP72 767 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 PRKACBP22694 351 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 SRSF2Q01130 221 aaKnown RBP10.06□□□□□ -0.8
ZNF548-209ENST00000598895 MEF2DQ14814 521 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 C2orf76Q3KRA6 126 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 LIN54Q6MZP7 749 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 FAM90A1Q86YD7 464 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 SLC38A6Q8IZM9 456 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 BATF2Q8N1L9 274 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 EIF4E3Q8N5X7 224 aaKnown RBP10.06□□□□□ -0.8
ZNF548-209ENST00000598895 NKAIN3Q8N8D7 197 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 OR51D1Q8NGF3 324 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 OR5T2Q8NGG2 359 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 NPRL2Q8WTW4 380 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 TECTBQ96PL2 329 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 SSBP3Q9BWW4 388 aaPredicted RBP10.06□□□□□ -0.8
ZNF548-209ENST00000598895 ARL6Q9H0F7 186 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 ATG5Q9H1Y0 275 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 SLC25A32Q9H2D1 315 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 C7orf69Q9H7B7 122 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 CTSZQ9UBR2 303 aa10.06□□□□□ -0.8
ZNF548-209ENST00000598895 NIPBLQ6KC79 2804 aaeCLIP10.05□□□□□ -0.8
ZNF548-209ENST00000598895 FXYD6-FXYD2A0A087WZ82 144 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 TRAV38-1A0A0B4J264 116 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 RFPL4AA6NLU0 287 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 TMEM210A6NLX4 147 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 DISC1C4P0D8 188 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 RFPL4AL1F8VTS6 287 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 RHBDL1O75783 438 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 RAB3DO95716 219 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 LHBP01229 141 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 NMBP08949 121 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 CD37P11049 281 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 RAB6AP20340 208 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 HTR2CP28335 458 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 GNG3P63215 75 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 CEACAM21Q3KPI0 293 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 C4orf46Q504U0 113 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 SMUG1Q53HV7 270 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 RAB12Q6IQ22 244 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 HAGHLQ6PII5 290 aaPredicted RBP10.05□□□□□ -0.8
ZNF548-209ENST00000598895 DUX4L9Q6RFH8 374 aaPredicted RBP10.05□□□□□ -0.8
ZNF548-209ENST00000598895 C1orf229Q6ZS94 237 aaPredicted RBP10.05□□□□□ -0.8
ZNF548-209ENST00000598895 FGFRL1Q8N441 504 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 C12orf45Q8N5I9 185 aaPredicted RBP10.05□□□□□ -0.8
ZNF548-209ENST00000598895 LHFPL5Q8TAF8 219 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 CCL13Q99616 98 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 FXYD6Q9H0Q3 95 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 TLNRD1Q9H1K6 362 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 WDR13Q9H1Z4 485 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 CLN8Q9UBY8 286 aa10.05□□□□□ -0.8
ZNF548-209ENST00000598895 TMEM272A0A1B0GTI8 110 aa10.04□□□□□ -0.8
ZNF548-209ENST00000598895 FAM230AA0A1W2PPH8 454 aa10.04□□□□□ -0.8
ZNF548-209ENST00000598895 TMEM82A0PJX8 343 aa10.04□□□□□ -0.8
ZNF548-209ENST00000598895 A8MXK9 166 aa10.04□□□□□ -0.8
ZNF548-209ENST00000598895 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.04□□□□□ -0.8
ZNF548-209ENST00000598895 CYB5AP00167 134 aa10.04□□□□□ -0.8
ZNF548-209ENST00000598895 IFNA2P01563 188 aa10.04□□□□□ -0.8
ZNF548-209ENST00000598895 MGMTP16455 207 aa10.04□□□□□ -0.8
ZNF548-209ENST00000598895 CCL1P22362 96 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms