RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 ACP7Q6ZNF0 438 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 DNM1P46Q6ZS02 220 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 LINC00299Q6ZSB3 139 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 ZNF826PQ6ZT77 177 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 RNF144BQ7Z419 303 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 FAM58AQ8N1B3 248 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 OSR2Q8N2R0 312 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 GCSAMQ8N6F7 178 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 OR51T1Q8NGJ9 327 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 EMG1Q92979 244 aaKnown RBP8.64□□□□□ -1.03
SMG9-207ENST00000598860 TIMD4Q96H15 378 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 NXF2Q9GZY0 626 aaKnown RBP8.64□□□□□ -1.03
SMG9-207ENST00000598860 TMPRSS5Q9H3S3 457 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 SEBOXQ9HB31 216 aaPredicted RBP8.64□□□□□ -1.03
SMG9-207ENST00000598860 HMG20AQ9NP66 347 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 OR5V1Q9UGF6 321 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 GLS2Q9UI32 602 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 HSF4Q9ULV5 492 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 HIVEP2P31629 2446 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 ABCA1O95477 2261 aa8.64□□□□□ -1.03
SMG9-207ENST00000598860 NF1P21359 2839 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 A0A0A6YYH2 397 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 TRAV38-1A0A0B4J264 116 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 TMEM272A0A1B0GTI8 110 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 METTL21EPA6NDL7 271 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 A6NJ64 397 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 TMEM178BH3BS89 294 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 LGALS8O00214 317 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 RP2O75695 350 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 CRTAPO75718 401 aaPredicted RBP8.63□□□□□ -1.03
SMG9-207ENST00000598860 SFTPBP07988 381 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 NDUFB7P17568 137 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 S100A5P33763 92 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 PMELP40967 661 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 PCP4P48539 62 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 PDLIM4P50479 330 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 RBM11P57052 281 aaKnown RBP8.63□□□□□ -1.03
SMG9-207ENST00000598860 QRFPP83859 136 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 ARL6IP1Q15041 203 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 SPRNQ5BIV9 151 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 UBE2NLQ5JXB2 153 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 TEX36Q5VZQ5 186 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 C1QL2Q7Z5L3 287 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 LRRC28Q86X40 367 aaPredicted RBP8.63□□□□□ -1.03
SMG9-207ENST00000598860 MUC20Q8N307 709 aaPredicted RBP8.63□□□□□ -1.03
SMG9-207ENST00000598860 MAPK1IP1LQ8NDC0 245 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 RAB40AQ8WXH6 277 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 CCL17Q92583 94 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 RAB1CQ92928 201 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 FAM46BQ96A09 425 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 PHF21AQ96BD5 680 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 NKX3-1Q99801 234 aaPredicted RBP8.63□□□□□ -1.03
SMG9-207ENST00000598860 NUDT16L1Q9BRJ7 211 aaKnown RBP8.63□□□□□ -1.03
SMG9-207ENST00000598860 ELOVL1Q9BW60 279 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 TM2D1Q9BX74 207 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 C6orf62Q9GZU0 229 aaPredicted RBP8.63□□□□□ -1.03
SMG9-207ENST00000598860 RBFOX1Q9NWB1 397 aaKnown RBP8.63□□□□□ -1.03
SMG9-207ENST00000598860 RHBDL2Q9NX52 303 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 NLKQ9UBE8 527 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 PEX16Q9Y5Y5 336 aa8.63□□□□□ -1.03
SMG9-207ENST00000598860 ZANQ9Y493 2812 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 KIAA2026Q5HYC2 2103 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 PPIAL4EA0A075B759 164 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 OOEPA6NGQ2 149 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 PPIAL4DF5H284 164 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 NDUFS8O00217 210 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 NDUFA2O43678 99 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 CLPXO76031 633 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 PAHP00439 452 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 APOA1P02647 267 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 PPIAL4FP0DN26 164 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 HKR1P10072 659 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 PRKACAP17612 351 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 NPBWR2P48146 333 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 TMEM33P57088 247 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 RPS27AP62979 156 aaKnown RBP8.62□□□□□ -1.03
SMG9-207ENST00000598860 UNC119Q13432 240 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 ZNF146Q15072 292 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 MICBQ29980 383 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 RAB12Q6IQ22 244 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 ZNF525Q8N782 197 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 SAMD12Q8N8I0 201 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 CHST4Q8NCG5 386 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 OR56B1Q8NGI3 324 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 OR10K1Q8NGX5 313 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 YIPF5Q969M3 257 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 WDFY2Q96P53 400 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 THAP7Q9BT49 309 aaPredicted RBP8.62□□□□□ -1.03
SMG9-207ENST00000598860 DNTTIP1Q9H147 329 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 ABCG5Q9H222 651 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 SPACA1Q9HBV2 294 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 COMMD3Q9UBI1 195 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 RABL2AQ9UBK7 228 aaPredicted RBP8.62□□□□□ -1.03
SMG9-207ENST00000598860 RABL2BQ9UNT1 228 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 ST3GAL6Q9Y274 331 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 PPIAL4AQ9Y536 164 aa8.62□□□□□ -1.03
SMG9-207ENST00000598860 YLPM1P49750 1951 aaKnown RBP8.62□□□□□ -1.03
SMG9-207ENST00000598860 NSD1Q96L73 2696 aaPredicted RBP8.61□□□□□ -1.03
SMG9-207ENST00000598860 IGHV4-30-2A0A087WSY4 118 aa8.61□□□□□ -1.03
SMG9-207ENST00000598860 A0A0B4J203 849 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms