RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 PLPPR1Q8TBJ4 325 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 RTN4IP1Q8WWV3 396 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 NMES1Q9C002 83 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 RIMS4Q9H426 269 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 SLC2A9Q9NRM0 540 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 UFSP2Q9NUQ7 469 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 TNFSF18Q9UNG2 199 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 A0A1B0GWJ7 208 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 C4BPBP20851 252 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 CEBPDP49716 269 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 HERV-K104P61576 105 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 SP6Q3SY56 376 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 ABCA11PQ4W5N1 156 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 PAN3Q58A45 887 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 ZNF880Q6PDB4 577 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 FAM219AQ8IW50 185 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 PIK3IP1Q96FE7 263 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 RSRP1Q9BUV0 290 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 TLNRD1Q9H1K6 362 aa14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 METTL8Q9H825 291 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 TMA7Q9Y2S6 64 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-216ENST00000598201 TRAV39A0A0B4J263 110 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 KIR2DS1A0A191URI9 304 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 A6NLC8 198 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 ACAA1P09110 424 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 KIR2DS4P43632 304 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 KIR2DS1Q14954 304 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 WDR82Q6UXN9 313 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 C1orf174Q8IYL3 243 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 SLC38A6Q8IZM9 456 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 OR8H3Q8N146 312 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 NAA60Q9H7X0 242 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 RASL12Q9NYN1 266 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 MBD2Q9UBB5 411 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 DUSP13Q9UII6 198 aa14.39□□□□□ -0.11
SHKBP1-216ENST00000598201 RNF222A6NCQ9 220 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 KCNAB3O43448 404 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 IFNA7P01567 189 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 CRYAAP02489 173 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 TK1P04183 234 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 OR5AC1P0C628 307 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 PSMB6P28072 239 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 NKX6-1P78426 367 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 C3orf36Q3SXR2 165 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 ST6GALNAC3Q8NDV1 305 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 PCNPQ8WW12 178 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 C1orf123Q9NWV4 160 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 OR14J1Q9UGF5 321 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 IGKV1D-13A0A0B4J2D9 117 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 H0YIZ8 118 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 SH2D1BO14796 132 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 TFF1P04155 84 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 IGKV1-13P0DP09 117 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 ZNF250P15622 560 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 CTAG1AP78358 180 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 TMEM187Q14656 261 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 SPIN3Q5JUX0 258 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 MRGPRGQ86SM5 289 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 RELL2Q8NC24 303 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 RNF126Q9BV68 326 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 PIGMQ9H3S5 423 aa14.38□□□□□ -0.11
SHKBP1-216ENST00000598201 ATP6V1G2-DDX39BF2Z307 99 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 TUSC2O75896 110 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 CRYZL1O95825 349 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 HAND1O96004 215 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 M6PRP20645 277 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 GNRHRP30968 328 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 KCNJ3P48549 501 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 CYCSP99999 105 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 IL15RAQ13261 267 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 VHLLQ6RSH7 139 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 ZNF497Q6ZNH5 498 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 OR2Z1Q8NG97 314 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 THAP6Q8TBB0 222 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 GALNT14Q96FL9 552 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 UBQLN2Q9UHD9 624 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 ZSCAN5BA6NJL1 495 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 PSPNO60542 156 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 RP2O75695 350 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 GLRXP35754 106 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 HLA-DRB3P79483 266 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 BEX5Q5H9J7 111 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 TMEM171Q8WVE6 324 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 MRPL24Q96A35 216 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 C2orf50Q96LR7 162 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 SYT3Q9BQG1 590 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 MAB21L2Q9Y586 359 aa14.37□□□□□ -0.11
SHKBP1-216ENST00000598201 RPS10-NUDT3A0A1W2PQS6 291 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 DIRAS3O95661 229 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 IGHV3-13P01766 116 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 MDH2P40926 338 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 RBPJQ06330 500 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 SPRNQ5BIV9 151 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 ACP7Q6ZNF0 438 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 LDLRAD3Q86YD5 345 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 GAPTQ8N292 157 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 KCNRGQ8N5I3 272 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 SECTM1Q8WVN6 248 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 KIRREL1Q96J84 757 aa14.36□□□□□ -0.11
SHKBP1-216ENST00000598201 TREM2Q9NZC2 230 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms